Query= MSMg01no515_i07.b1 MSMg01no515_i07.b1 CHROMAT_FILE:
MSMg01no515_i07.b1 PHD_FILE: MSMg01no515_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:52 2005
(407 letters)
>mm_chr7_138018827_138019633
Length = 807
Score = 648 bits (335), Expect = 0.0
Identities = 380/405 (93%), Gaps = 17/405 (4%)
Strand = Plus / Plus
Query: 4 ggaattcattcttgta-tatcttttcctttattttttgctctctctctctctctctctct 62
||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ggaattcattcttataatatattttcctttattttttgctctctctctctctctctctct 278
Query: 63 ctctctctctctctctcacacacacacacacacacagagcattgttgttatatttacctc 122
| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 c----------------acacacacacacacacacagagcattgttgttatatttacctc 322
Query: 123 attaccttctatgatctaccttattttctttttgaacttcttattcttcccaactagtct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 attaccttctatgatctaccttattttctttttgaacttcttattcttcccaactagtct 382
Query: 183 cccagagactacatcattaaagcagccgttatcagaccattatcaggcagtagcttgtga 242
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 383 cccagagactacatcattaaagcaaccgttatcagaccattatcaggcagtagcttgtga 442
Query: 243 ggaaaggatggagccccatgcatacagcctaggtctgtgatggcatgttgaagggcccag 302
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 443 ggaaaggatggagccctatgcatacagcctatgtctgtgatggcatgttgaagggtccag 502
Query: 303 tcttgtgaaggtatccataactgctgttcataattgcaatggcagtgtcgtgtctggatg 362
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 503 tcttgtgaaggtatccatagctgctgttcataattgcaatggcagtgtcatgtctggatg 562
Query: 363 gcagtattttgtggcactttcttccttcctccagttttttaattc 407
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gcagtattttgtggcactttcttccttcctccagttttttaattc 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_i07.g1 MSMg01no515_i07.g1 CHROMAT_FILE:
MSMg01no515_i07.g1 PHD_FILE: MSMg01no515_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:52 2005
(608 letters)
>mm_chr7_138221951_138222956
Length = 1006
Score = 905 bits (468), Expect = 0.0
Identities = 576/614 (93%), Gaps = 14/614 (2%)
Strand = Plus / Minus
Query: 1 tgtagttcaaacagaagttctcattgtgaacatttaccataggtaaaacagtcctcctga 60
||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 806 tgtagttcaaacagaagctctcattgtgaacctttaccataggtaaaacagtcttcctga 747
Query: 61 gaaactgcctccaactagcaagagaagtgacttccagtgattactgtgggaggtcagaat 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 746 gaaactgcctccaactagcaagagaagcgacttccagtgattactgtgggaggtcagaat 687
Query: 121 aaacacagtcacaatgtggctgccagcagggccatgttccttttaagggccattctcagg 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 686 aaacacagtcacaatgtggctgccggcagggccatgttccttttaagggccattctcagg 627
Query: 181 tgggcggggatctccacagtcacactatgttccctgtaacttgtgcacagtaaactctat 240
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 626 tgggtggggatctccacagtcacactatgttccctgtaacttgcgcacagtaaactctat 567
Query: 241 gtatcaatggctaaaccagcaattcacatgggaacacagttgctgttgttggacatcttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gtatcaatggctaaaccagcaattcacatgggaacacagttgctgttgttggacatcttc 507
Query: 301 acagggtgctatgaggattggcaaatgccacctgatccttccaaggtgttcccaaagaag 360
||||||| | |||| ||| || ||| ||||||||| |||||||||||||| |||||||||
Sbjct: 506 acagggt-caatgacgatagg-aaaggccacctgagccttccaaggtgtt-ccaaagaag 450
Query: 361 gctcttggtctgcaggacacaaacttactgccctctgctggtcactctctgattggttcc 420
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gctctgggtctggaggacacaaacttactgccctctgctggtcactctctgattggttcc 390
Query: 421 ccctagagaactgcaaggcttggtttggtcctttctagaagttggtc-aaaatcttcctc 479
||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 389 ccctagagaactgcaagccttggtttggccctttctagaagttggtcaaaaatcttcctc 330
Query: 480 -tggat-tcc--ccgacatgtatgtgttctgttaaaagtacatactacctgtgatagctg 535
|| || ||| | ||| ||| ||||||||||||| |||||||||||||| |||||||
Sbjct: 329 ttgcatctccaac--aca--tatatgttctgttaaaactacatactacctgtaatagctg 274
Query: 536 agcattcatgatatgcaatatttttaattttggaaggaag-agtaagtgactgtcttcca 594
|||||| ||||| |||||||||||||||||||||||| || ||| ||||||||| |||||
Sbjct: 273 agcattgatgatgtgcaatatttttaattttggaagg-agtagtcagtgactgtattcca 215
Query: 595 ctagcccttctgac 608
||||||||||||||
Sbjct: 214 ctagcccttctgac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1006
Length adjustment: 10
Effective length of query: 598
Effective length of database: 996
Effective search space: 595608
Effective search space used: 595608
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
