Query= MSMg01no517_b08.b1 MSMg01no517_b08.b1 CHROMAT_FILE:
MSMg01no517_b08.b1 PHD_FILE: MSMg01no517_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:03 2005
(604 letters)
>mm_chr7_84634128_84635131
Length = 1004
Score = 1108 bits (573), Expect = 0.0
Identities = 593/600 (98%)
Strand = Plus / Plus
Query: 5 gaattcatggtcaccagcagcttgcatctgacggtagctccagagaagtgtaaccaagaa 64
|||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 205 gaattcataatcaccagcagcttgcatctgatggtagctccagagaagtgtaaccaagaa 264
Query: 65 tggtgatacactctgattgcagatagtaagcacctatggtcaggatttccaggtggaata 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggtgatacactctgatcgcagatagtaagcacctatggtcaggatttccaggtggaata 324
Query: 125 aaagggtaaagaggaatgccagaatccatctctcactacttctcaaacatggaaaatttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagggtaaagaggaatgccagaatccatctctcactacttctcaaacatggaaaatttg 384
Query: 185 agcagctgcctcacattccctttaccatgacttctctatcatcagcaccatgacttcccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcagctgcctcacattccctttaccatgacttctctatcatcagcaccatgacttcccc 444
Query: 245 accatgacagatcacatccattcaaattatgataattatgatatgtcttgcccaaagaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 accatgacagatcacatccattcaaattatgataattatgatatgtcttgcccaaagaat 504
Query: 305 tcctcctgcactgtttcttattaagtcaacagcaattataaaagtagccaatatacttgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcctcctgcactgtttcttattaagtcaacagcaattataaaagtagccaatatacttgt 564
Query: 365 ttcataattttaaagagagagaatgacatcataaatagggtcttgttaatgggatagagt 424
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 565 ttcataattttaaagagagagaatgacatcataaatagggtcttggtaatggaatagagt 624
Query: 425 ttagtggcagagcatttgcctagcatgtgttggacctgggttcaaatcccacctggggaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttagtggcagagcatttgcctagcatgtgttggacctgggttcaaatcccacctggggaa 684
Query: 485 gagagaaagtcagggttaacttgggcttctttcttttcagtggtttattagaagttaatc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gagagaaagtcagggttaacttgggcttctttcttttcagtggtttattagaagttaatc 744
Query: 545 ccttcttatttccatggnaggagttagatccacatgctgatgctgtctatattttcagat 604
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ccttcttatttccatggtaggagttagatccacatgctgatgctgtctatattttcagat 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_b08.g1 MSMg01no517_b08.g1 CHROMAT_FILE:
MSMg01no517_b08.g1 PHD_FILE: MSMg01no517_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:03 2005
(242 letters)
>mm_chr7_84787728_84788363
Length = 636
Score = 362 bits (187), Expect = e-104
Identities = 218/231 (94%), Gaps = 10/231 (4%)
Strand = Plus / Minus
Query: 1 accatttttaacactgtagtcctagttca-ctgattcacctcttctaacactctattcct 59
|||||||||||||||||| |||||| | | ||||||||||||||||||||||||||||||
Sbjct: 423 accatttttaacactgtattcctagct-agctgattcacctcttctaacactctattcct 365
Query: 60 attagcaatagtgctgtggtaccaacttgggtgcatatgttgcttgacacattttaatat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 attagcaatagtgctgtggtaccaacttgggtgcatatgttgcttgacacattttaatat 305
Query: 120 ttcagtgtgtataattaagggtggaattatttggtcccataatgatttaatttaatgatt 179
|||||||||||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 304 ttcagtgtgtataattaagggtggaattatttggtcccataatg-----atttactg-tt 251
Query: 180 t-aaccttgagtaattcactaattccactcttgggttttttttnggggggg 229
| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 250 taaaccttgagtaattcactaattccactcttgggtttttttt-ggggggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 636
Length adjustment: 9
Effective length of query: 233
Effective length of database: 627
Effective search space: 146091
Effective search space used: 146091
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
