Query= MSMg01no517_b11.b1 MSMg01no517_b11.b1 CHROMAT_FILE:
MSMg01no517_b11.b1 PHD_FILE: MSMg01no517_b11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:03 2005
(708 letters)
>mm_chr7_36807887_36808994
Length = 1108
Score = 1274 bits (659), Expect = 0.0
Identities = 671/677 (99%), Gaps = 5/677 (0%)
Strand = Plus / Minus
Query: 36 aattgtctataattcctgctccagggacctgatgcccccgtctggcttctgtggtcacta 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 aattgtctataattcctgctccagggacctgatgcccccgtctggcttctgtggtcacta 1049
Query: 96 catgtatatggtacacattcagacaagcaggcacacaagtgcacctagatgaaaataaat 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 catgtatatggtacacattcagacaagcaggcacacaagtgcacctagatgaaaataaat 989
Query: 156 aaaaattttaagagattcagaccttttttaagagtagagtt----acacacacacacaca 211
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 988 aaaaattttaagagattcagacc-tttttaagagtagagttacacacacacacacacaca 930
Query: 212 cacacacacacacacacacacttatatagcatgtccgtgcagtatatatgtataaaatgc 271
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 929 cacacacacacacacacacacttatatagcgtgtccgtgcagtatatatgtataaaatgc 870
Query: 272 ttgactgtttcgtgccgaatccctatgaataatttaatgtgagatgtatgctttgaaagc 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 ttgactgtttcgtgccgaatccctatgaataatttaatgtgagatgtatgctttgaaagc 810
Query: 332 aatcggctgcattccatggccaggagctggatcagagctggagagtcagccatccagcat 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 aatcggctgcattccatggccaggagctggatcagagctggagagtcagccatccagcat 750
Query: 392 tgttatatatgtccagaagccaccgtaaattcactgcaaaaggcaagatccctggtttct 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tgttatatatgtccagaagccaccgtaaattcactgcaaaaggcaagatccctggtttct 690
Query: 452 gagagcagagggtcactagaaacaaatcaagagggcacggctttatttaattgagaacta 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gagagcagagggtcactagaaacaaatcaagagggcacggctttatttaattgagaacta 630
Query: 512 aatatctctgcaattgttttctctctcccaaggaaggtcattttgctgcgcgagcatgtc 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aatatctctgcaattgttttctctctcccaaggaaggtcattttgctgcgcgagcatgtc 570
Query: 572 agcacctcctgggtggctctgtccctgagcagatccagatttcccatctgcattgcgggt 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 agcacctcctgggtggctctgtccctgagcagatccagatttcccatctgcattgcgggt 510
Query: 632 tccctcgtctgcaccacaagaacacaagctgccaagccaacatttggatttccaacatcc 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tccctcgtctgcaccacaagaacacaagctgccaagccaacatttggatttccaacatcc 450
Query: 692 ttccccacacccccgag 708
|||||||||||||||||
Sbjct: 449 ttccccacacccccgag 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 708
Length of database: 1108
Length adjustment: 10
Effective length of query: 698
Effective length of database: 1098
Effective search space: 766404
Effective search space used: 766404
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no517_b11.g1 MSMg01no517_b11.g1 CHROMAT_FILE:
MSMg01no517_b11.g1 PHD_FILE: MSMg01no517_b11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:03 2005
(195 letters)
>mm_chr7_36609927_36610521
Length = 595
Score = 356 bits (184), Expect = e-103
Identities = 184/184 (100%)
Strand = Plus / Plus
Query: 2 acataaggcgctctgctgtggtgtacagacattggactagatttagattggaaatcaaat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 acataaggcgctctgctgtggtgtacagacattggactagatttagattggaaatcaaat 261
Query: 62 ggttggggttctgtggactcagagccctttttccccgaacccaacccacttgtttgtata 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggttggggttctgtggactcagagccctttttccccgaacccaacccacttgtttgtata 321
Query: 122 ctgtgttgggactggagtaagcatgtagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctgtgttgggactggagtaagcatgtagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 381
Query: 182 tgtg 185
||||
Sbjct: 382 tgtg 385
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
