Query= MSMg01no518_p03.b1 MSMg01no518_p03.b1 CHROMAT_FILE:
MSMg01no518_p03.b1 PHD_FILE: MSMg01no518_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:31 2005
(588 letters)
>mm_chr7_37391462_37392449
Length = 988
Score = 1060 bits (548), Expect = 0.0
Identities = 575/584 (98%)
Strand = Plus / Plus
Query: 5 gaattccacccttcacttgagcttcaaaacaatattttcctcattatctcactcaaatcc 64
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 205 gaattccacccttcacttgagcttcaaaacaatattttcctcaacatctgactcaaatcc 264
Query: 65 aaaactctgaggatccctttgaaggttcactgtacttttagaaaaagtgactttctacat 124
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 265 aaaactctgaggatccctttgaaggttcactgtacttctagaaagagtgactttctacac 324
Query: 125 ggaggaactccctgtggagaaccaacccaggcttcccaataattcctcaatgaaatcccc 184
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaggaactccccatggagaaccaacccaggcttcccaataattcctcaatgaaatcccc 384
Query: 185 cagtagaggcaacatacgcaaggacagtcatttggcactgttttgccattagaagagaaa 244
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagtagaggcaacatgcgcaaggacagtcatttggcactgttttgccattagaagagaaa 444
Query: 245 tttggtccctgcctgagccccactgaattctgtagagttcgctctgaggcactaacttga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttggtccctgcctgagccccactgaattctgtagagttcgctctgaggcactaacttga 504
Query: 305 aaaacactaatcacagatcacttttcttggagctaagacggttccttttcccctaggtgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaaacactaatcacagatcacttttcttggagctaagacggttccttttcccctaggtgt 564
Query: 365 caggatctctaagttgacataattctgcacaaatcactctgcctgtgtaacttagaatgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caggatctctaagttgacataattctgcacaaatcactctgcctgtgtaacttagaatgt 624
Query: 425 cccaatcccctttggaccctggcctctgtaactgggccatcactcacttaatctcacctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cccaatcccctttggaccctggcctctgtaactgggccatcactcacttaatctcacctt 684
Query: 485 atctttaaataaatgtaaccagaagggacttgttcggctcgccacctcttgagtgatgtg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atctttaaataaatgtaaccagaagggacttgttcggctcgccacctcttgagtgatgtg 744
Query: 545 aattatttatacagtcttcataggcatttgttaagctgcacaca 588
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aattatttatacagtcttcataggcatttgttaagctgcacaca 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_p03.g1 MSMg01no518_p03.g1 CHROMAT_FILE:
MSMg01no518_p03.g1 PHD_FILE: MSMg01no518_p03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:31 2005
(655 letters)
>mm_chr7_37570414_37571469
Length = 1056
Score = 1261 bits (652), Expect = 0.0
Identities = 655/656 (99%), Gaps = 1/656 (0%)
Strand = Plus / Minus
Query: 1 aaatagtttccaccaccctctctactttactccttagaaatcatgtacttatcaaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 aaatagtttccaccaccctctctactttactccttagaaatcatgtacttatcaaatatt 797
Query: 61 ctagtcaagccgttttcggatgtctcttctagtaagataggtttttaatgtatttctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ctagtcaagccgttttcggatgtctcttctagtaagataggtttttaatgtatttctctc 737
Query: 121 tcgtttttttttttaattttacatttgcatttttaagttcactttgt-aaaaaaaaaaaa 179
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 736 tcgtttttttttttaattttacatttgcatttttaagttcactttgtaaaaaaaaaaaaa 677
Query: 180 attaccgtggagaaattatttaagtgtttttttattcctgtttcttgaaaaatcttatct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 attaccgtggagaaattatttaagtgtttttttattcctgtttcttgaaaaatcttatct 617
Query: 240 ttaaataatctatatcctcaattttatttatgccataaaccgttcctatattttaatggt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ttaaataatctatatcctcaattttatttatgccataaaccgttcctatattttaatggt 557
Query: 300 ctgtttgctttaaaaggggttgttggttttaatagctcagttactatctttgtaaactaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ctgtttgctttaaaaggggttgttggttttaatagctcagttactatctttgtaaactaa 497
Query: 360 actccttctgacgaaactcaagcagatcatctctgcctgcgtgtggaaggcacattccaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 actccttctgacgaaactcaagcagatcatctctgcctgcgtgtggaaggcacattccaa 437
Query: 420 cccccgaaaaggaaacttaagccaaataaatgttcggcacaaattaaaatacataaaatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cccccgaaaaggaaacttaagccaaataaatgttcggcacaaattaaaatacataaaatg 377
Query: 480 aatagttaacttggacaagacctgacggacggagcagttgggctgcggacatgtgggtgt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aatagttaacttggacaagacctgacggacggagcagttgggctgcggacatgtgggtgt 317
Query: 540 tgggagagctggctgccaggcagggcttccagaaagaagaatccaaattaaattaatatc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tgggagagctggctgccaggcagggcttccagaaagaagaatccaaattaaattaatatc 257
Query: 600 ctgtgacctcctttgcccatttctctggacacactgatttcggggctggtaggacg 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ctgtgacctcctttgcccatttctctggacacactgatttcggggctggtaggacg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space: 674670
Effective search space used: 674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
