Query= MSMg01no519_e05.b1 MSMg01no519_e05.b1 CHROMAT_FILE:
MSMg01no519_e05.b1 PHD_FILE: MSMg01no519_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:56 2005
(584 letters)
>mm_chr7_25373057_25374040
Length = 984
Score = 984 bits (509), Expect = 0.0
Identities = 565/589 (95%), Gaps = 12/589 (2%)
Strand = Plus / Plus
Query: 5 gaattccatgtatcctctgaattcagcctttgggagccgttcaaaaagctcaggtcgatt 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatgtatagtctgaattcagcctttgggagccgttcaaaaagctcaggtcgatt 264
Query: 65 cgattctattcctccaagcctttacagaaagtttggctatttcttcagaaagggcaaggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cgattctattcctccaagcctttacagaaagtttggctatttcttcagaaagggcaaggg 324
Query: 125 gcagtactcca-ttgaccccccgaaggcacttgcatagtactttaggcacccttcaccga 183
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcagtactc-agttgaccccccgaaggcacttgcatagtactttaggcacccttcaccga 383
Query: 184 cattcaccacgcctagcacccggtgctacctactgcccctccctaggtggcctaggagtg 243
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 384 catttaccacgcctagcaccccgtgctacctactgcccctccctaggtggcctaggagtg 443
Query: 244 ccaggccaagggtgacattgagtgcttggcctacttccaggcagcgacagtacaacttcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccaggccaagggtgacattgagtgcttggcctacttccaggcagcgacagtacaacttcc 503
Query: 304 tgcccagcgctagtatgcctgtgatgtgctcataaaagtcctccgcactcagccggataa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgcccagcgctagtatgcctgtgatgtgctcataaaagtcctccgcactcagccggataa 563
Query: 364 tccatgaagtctggtcaaccctgggagccacgggagttatttggtggggctgagtaactg 423
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 564 tccatgacgtctggtcaaccctgggagtcacgggagttatttggtggggctgagtaactg 623
Query: 424 gtttgcactggactctgccaatttctagtcgtgtgacgatgaagaagtcacctcacagtt 483
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 624 gtttgcgctggactctgccaatttctagtcgtgtgacgatgaagaagtcaccttacagtt 683
Query: 484 ctgggcctcagtgtcttc--------aagtatattagagagccaatggaaaccggcttaa 535
|||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 684 atgggcctcagtgtcttatattatataagtatattagagaaccaatggaaaccggcttaa 743
Query: 536 acattgctattgttcaggcagcgttgctttttttttcttttgacacagg 584
||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 744 acattgctattgttcaggcagtgttgcttttttttt--tttgacacagg 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_e05.g1 MSMg01no519_e05.g1 CHROMAT_FILE:
MSMg01no519_e05.g1 PHD_FILE: MSMg01no519_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:56 2005
(507 letters)
>mm_chr7_25529959_25530865
Length = 907
Score = 801 bits (414), Expect = 0.0
Identities = 420/422 (99%)
Strand = Plus / Minus
Query: 86 gtaaactgggtgtgcctgtgataccagcgctgggaaagaagagatatttccattgagatt 145
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 gtaaactgggcgtgcctgtgataccagcgctgggaaagaagagatatttccattgagatt 848
Query: 146 cattaccaccctcaagtgtatagtgaattcaaatccaagctgagctatctgagactgtca 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 cattaccaccctcaagtgtatagtgaattcaaatccaagctgagctatctgagactgtca 788
Query: 206 aagagaaagcaagagtgagacaaagatcaagagaaacagagaaaagaagggagggaggga 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 aagagaaagcaagagtgagacaaagatcaagagaaacagagaaaagaagggagggaggga 728
Query: 266 ggcaaagaaggagggaaggatgctgagtgcctgtgtcaggttctgctaagcctgagtcct 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ggcaaagaaggagggaaggatgctgagtgcctgtgtcaggttctgctaagcctgagtcct 668
Query: 326 gcagctctacagggaagtgggaaggagagagaagcaaagcccagggtgccaagtgtggtg 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gcagctctacagggaagtgggaaggagagagaagcaaagcccagggtgccaagtgtggtg 608
Query: 386 tgaagggtagagtgtagagagaagcccagcaggggagaggagatgctgatcagggtgagg 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tgaagggtagagtgtagagagaagcccagcaggggagaggagatgctgatcagggtgagg 548
Query: 446 ctgcagcaaggtgcaggggctcagtgtgtggaggggcctggtaacagggtctgcaagggg 505
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ctgcagcatggtgcaggggctcagtgtgtggaggggcctggtaacagggtctgcaagggg 488
Query: 506 ca 507
||
Sbjct: 487 ca 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
