Query= MSMg01no520_f11.b1 MSMg01no520_f11.b1 CHROMAT_FILE:
MSMg01no520_f11.b1 PHD_FILE: MSMg01no520_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:22 2005
(691 letters)
>mm_chr7_138548164_138549254
Length = 1091
Score = 1276 bits (660), Expect = 0.0
Identities = 681/688 (98%), Gaps = 1/688 (0%)
Strand = Plus / Minus
Query: 5 gaattctcacctaaggaatactgaatggctgagaagcacctgaaaaaatgttcagcatcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 gaattctcacctaaggaatactgaatggctgagaagcacctgaaaaaatgttcagcatcc 934
Query: 65 ttaatcatcagggaaatgcaaatcaaaacaaccctgagattccacctcacaccagtcaga 124
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 ttaatcatcagggaaatgtaaatcaaaacaaccctgagattccacctcacaccagtcaga 874
Query: 125 atggctaagatcaaaaattcaggtgacagtagatgctggcaaggatatggagaaagagga 184
|||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||
Sbjct: 873 atggctaagatcaaaaattcaggtgacagtagatgctggcgaggatgtggataaagagga 814
Query: 185 acactcctccattgttggtgggattgcaagcttgtacaaccactctggaaattagtctgg 244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 813 acactcctccattgttggtgagattgcaagcttgtacaaccactctggaaattagtctgg 754
Query: 245 cagttcctcagaaaattggacatggtactaccggaggat-cccgcaatacctctcctggg 303
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 753 cagttcctcagaaaattggacatggtactaccggaggatccccgcaatacctctcctggg 694
Query: 304 catagaaattttcatttggagcaaaatcagttagcatagagtaggtctgactcaatgtag 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tatagaaattttcatttggagcaaaatcagttagcatagagtaggtctgactcaatgtag 634
Query: 364 tatcaaaatctataataataggaatgcttaaatatgtttttctgatgatattttacattg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tatcaaaatctataataataggaatgcttaaatatgtttttctgatgatattttacattg 574
Query: 424 aaaatatgggtaatttcttgttcaacaagtctaaggtgtcgagttcacagccagttagaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aaaatatgggtaatttcttgttcaacaagtctaaggtgtcgagttcacagccagttagaa 514
Query: 484 agatactgaatgaaaaagaaaaagaaataaaaaggaaaagaaaggatacgactggtccta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 agatactgaatgaaaaagaaaaagaaataaaaaggaaaagaaaggatacgactggtccta 454
Query: 544 ggtatggtggaggagctagtttattatagataagtgggagagcatagccggaggcagaca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ggtatggtggaggagctagtttattatagataagtgggagagcatagccggaggcagaca 394
Query: 604 cagctgagaaagtccagaggagtcatgaccctgagccatgaggggaggaggcaagggaga 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cagctgagaaagtccagaggagtcatgaccctgagccatgaggggaggaggcaagggaga 334
Query: 664 aagaagagagggaaaccaggtgcagcag 691
||||||||||||||||||||||||||||
Sbjct: 333 aagaagagagggaaaccaggtgcagcag 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_f11.g1 MSMg01no520_f11.g1 CHROMAT_FILE:
MSMg01no520_f11.g1 PHD_FILE: MSMg01no520_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:22 2005
(679 letters)
>mm_chr7_138361628_138362706
Length = 1079
Score = 1282 bits (663), Expect = 0.0
Identities = 675/679 (99%)
Strand = Plus / Plus
Query: 1 tacagactctttgatttctttctttactgacccagtagtcattgagtagagaattgttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacagactctttgatttctttctttactgacccagtagtcattgagtagagaattgttca 260
Query: 61 gtgtccatgagttgtgagctttctgttgtttctgttgttgttgaaatcccgctttaatcc 120
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 261 gtgtccatgagttgtgagctttctgctgtttctgttgttgttgagatcccgctttaatcc 320
Query: 121 atggtggtctgataagatacaggatgttatttccattttcttgtatctatttagacttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggtggtctgataagatacaggatgttatttccattttcttgtatctatttagacttac 380
Query: 181 tttgtgacaaggtatatagtcaatgttggagaaggttctatgaggtgctgagaacaaggt 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgtgacaaggtatatagtcagtgttggagaaggttctatgaggtgctgagaacaaggt 440
Query: 241 atatccttttgtgtttgggtgaaatgttctgtatatatctgttgggtccatttgagctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatccttttgtgtttgggtgaaatgttctgtatatatctgttgggtccatttgagctat 500
Query: 301 aacatctgttccattatttctcagattagtttcttgacagttgatgacctgtccactgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacatctgttccattatttctcagattagtttcttgacagttgatgacctgtccactgat 560
Query: 361 gagagtggggtgttgaagtcttccactattgatgtttggggttcaatgtgtgacttaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagagtggggtgttgaagtcttccactattgatgtttggggttcaatgtgtgacttaagc 620
Query: 421 tttaggtttaaccaatttttgatagtctattaccatttctaaaagtcacaataaagaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttaggtttaaccaatttttgatagtctattaccatttctaaaagtcacaataaagaagt 680
Query: 481 aatcatttaattgttttggaatacaattaaattatatttaattaaatgtgtttaaattaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatcatttaattgttttggaatacaattaaattatatttaattaaatgtgtttaaattaa 740
Query: 541 tgtttgtaaaggaattgatgaaattttttttaaaaaaaacctcacttgcagatgctaaca 600
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 741 tgtttgtaaaggaattgatgaaatttttttaaaaaaaaacctcacttgcagatgctaaca 800
Query: 601 agagtatagggagcctcagggaatcccctgttgaatctgatcagatcctaacatctcacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agagtatagggagcctcagggaatcccctgttgaatctgatcagatcctaacatctcacc 860
Query: 661 caagtatttgagatcctta 679
|||||||||||||||||||
Sbjct: 861 caagtatttgagatcctta 879
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
