Query= MSMg01no522_h11.b1 MSMg01no522_h11.b1 CHROMAT_FILE:
MSMg01no522_h11.b1 PHD_FILE: MSMg01no522_h11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:04 2005
(628 letters)
>mm_chr7_146746786_146747813
Length = 1028
Score = 833 bits (431), Expect = 0.0
Identities = 443/447 (99%), Gaps = 1/447 (0%)
Strand = Plus / Minus
Query: 183 tcagttccttgtttgcatggtaaacacttt-tccactgaacaacctagccacccccatgt 241
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1028 tcagttccttgtttgcatggtaaacactttatccactgaacaacctagccacccccatgt 969
Query: 242 tctcaaacccccatccctttttgtttgtttctttaaggtacaatctcacgtaacccaggc 301
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 tctcaaccccccatccctttttgtttgtttctttaaggtacaatctcacgtaacccaggc 909
Query: 302 tggcttcaaagtctgtgcagctgaggatgcccttgaattctctcctcttgtctacagctc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 tggcttcaaagtctgtgcagctgaggatgcccttgaattctctcctcttgtctacagctc 849
Query: 362 tgcagtaacggaactacaggaataaccacttaaatttcaccttaaggaaaggccagaacg 421
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 848 tgcagtaacggaactacaggaataaccacttaaatttcaccttaaggaaaggccagaatg 789
Query: 422 gtgtgtgctgaatgcagattatctttcagagaacaaggctggtcactccaatggcatagc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 gtgtgtgctgaatgcagattatctttcagagaacaaggctggtcactccaatggcatagc 729
Query: 482 accttctctgtctagatgctaagacagccatttggagcccttagaccccagtggcatact 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 accttctctgtctagatgctaagacagccatttggagcccttagaccccagtggcatact 669
Query: 542 cctggatgtttctaggacacagtctccaattccccctcccagtgctgcccaaggtcaaat 601
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cctggatgtttctaggacacactctccaattccccctcccagtgctgcccaaggtcaaat 609
Query: 602 tatatcttctccttaactgctggagtc 628
|||||||||||||||||||||||||||
Sbjct: 608 tatatcttctccttaactgctggagtc 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_h11.g1 MSMg01no522_h11.g1 CHROMAT_FILE:
MSMg01no522_h11.g1 PHD_FILE: MSMg01no522_h11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:04 2005
(504 letters)
>mm_chr7_146590827_146591730
Length = 904
Score = 917 bits (474), Expect = 0.0
Identities = 495/504 (98%), Gaps = 4/504 (0%)
Strand = Plus / Plus
Query: 1 agaggaggaactgaagcagagcccttggaaggatgctgcgtacttctgcgatccccgtgg 60
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 agaggaggaactgaagcagaacccttggaaggatgctgcttacttctgcgatccccgtgg 264
Query: 61 cttgctcagttttctgcccatgcatgtgtggtccactcacagtgggctgagtccttcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttgctcagttttctgcccatgcatgtgtggtccactcacagtgggctgagtccttcaca 324
Query: 121 tcaatcactcatcaagaagatgcctcacaggcttgtataaagaccactctactggaggca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaatcactcatcaagaagatgcctcacaggcttgtataaagaccactctactggaggcg 384
Query: 181 tcttcccagttgaggctccctcttcccagatgaccttagcgtacgtccatccggttgaca 240
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 385 tcttcccagttgaggctccctcttcccagatgaccttagcgtacgtcca----gttgaca 440
Query: 241 aagaaacctaacctgcactctctctgttgactactgcgactgacactaggaagaaagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaaacctaacctgcactctctctgttgactactgcgactgacactaggaagaaagcag 500
Query: 301 catttcaggaagactcttgaagaaatgacctcggagcgcttcccattcagcagccctttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catttcaggaagactcttgaagaaatgacctcggagcgcttcccattcagcagccctttg 560
Query: 361 cagtgaacgcctgggggcatctgttttgtgtgcacaccctgtaggcttggagaatatgga 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagcgaacgcctgggggcatctgttttgtgtgcacaccctgtaggcttggagaatatgga 620
Query: 421 gaccaggccaacctgcctcacttgggttgtgactcatttgcttgtcttattcctgatgat 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 621 gaccaggccaacctgcctcacttgggctgtgactcatttgcttgtcttattcctgatgat 680
Query: 481 ggcctttgctgcaggccctggcct 504
||||||||||||||||||||||||
Sbjct: 681 ggcctttgctgcaggccctggcct 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
