Query= MSMg01no523_e20.b1 MSMg01no523_e20.b1 CHROMAT_FILE:
MSMg01no523_e20.b1 PHD_FILE: MSMg01no523_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:10 2005
(679 letters)
>mm_chr7_140116050_140117128
Length = 1079
Score = 1162 bits (601), Expect = 0.0
Identities = 632/643 (98%), Gaps = 5/643 (0%)
Strand = Plus / Plus
Query: 5 gaatggcattacttggaaactgactaaattgaaatattaatcatcaaatatttttaaagc 64
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaatggcattacaaggaaactgactaaattgaaatattaatcatcaaatatttttaaagc 264
Query: 65 ctgtaatattcattcatatgcttcagtgatatattaaatgaccagatccaatgacagatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgtaatattcattcatatgcttcagtgatatattaaatgaccagatccaatgacagatc 324
Query: 125 atttggctaccatggctttgaagctgtgaatataaatcatattttgagatggacacaacc 184
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttggctaccaaggctttgaagctgtgaatataaatcatattttgagatggacacaacc 384
Query: 185 ataaggtaactggagacagaatctatgcttctggtgctaagcataggtctgctaaagcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ataaggtaactggagacagaatctatgcttctggtgctaagcataggtctgctaaagcta 444
Query: 245 ttgcagttgctgattgtgctaagaagtgatccacatgctacatcttggttaataatcaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgcagttgctgattgtgctaagaagtgatccacatgctacatcttggttaataatcaat 504
Query: 305 gtgtatttttcttcccatccaagttcagggtctgctagagagagaggatgaagacccttg 364
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgtatttttcttcccattcaagttcagggtctgctagagagagaggatgaagacccttg 564
Query: 365 ggttaggtactacccccctccattagcttggacacagacagccttatttgtctctacact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggttaggtactacccccctccattagcttggacacagacagccttatttgtctctacact 624
Query: 425 ggcagttcttgatacagtgtctggtatagattcattctccaaaaaccattgtctgattaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggcagttcttgatacagtgtctggtatagattcattctccaaaaaccattgtctgattaa 684
Query: 485 acaaaacagaaagcaaatcaagtgcttgtgaagactccaatgacttcctgtctcttacct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acaaaacagaaagcaaatcaagtgcttgtgaagactccaatgacttcctgtctcttacct 744
Query: 545 tgctaggtcctcagtaactgccaggagaattgtattttgtgattttctttcttttctttt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgctaggtcctcagtaactgccaggagaattgtattttgtgattttctttcttttctttt 804
Query: 605 tctttctttctttctttcttt-ctttcttt-ctttc--tttct 643
|||||||||||||||| ||| ||| |||| ||||| |||||
Sbjct: 805 tctttctttctttcttg-tttgcttgcttttctttccttttct 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_e20.g1 MSMg01no523_e20.g1 CHROMAT_FILE:
MSMg01no523_e20.g1 PHD_FILE: MSMg01no523_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:10 2005
(524 letters)
>mm_chr7_140149045_140149968
Length = 924
Score = 1006 bits (520), Expect = 0.0
Identities = 523/524 (99%)
Strand = Plus / Minus
Query: 1 caagacaaccaaggtctctaacctacccaactccctgtgtgcaaaaataaaacaagcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 caagacaaccaaggtctctaacctacccaactccctgtgtgcaaaaataaaacaagcatg 849
Query: 61 taatcaagttgggggaggttaggaaagaaaatcacacatctctgaatattttcagtttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 taatcaagttgggggaggttaggaaagaaaatcacacatctctgaatattttcagtttgc 789
Query: 121 tatttgttttgggccacattcagagctatccttggtggcatatgatgtgaggaccatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tatttgttttgggccacattcagagctatccttggtggcatatgatgtgaggaccatgag 729
Query: 181 ctggtggtcatccaatcagtgaatcatcaagtgagaaagcatgttatataagtactgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ctggtggtcatccaatcagtgaatcatcaagtgagaaagcatgttatataagtactgagt 669
Query: 241 tcatgaagacgagcacaaagctatctgcttctcggtcaaaaacatcaaacagcaaagtct 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 668 tcatgaagacgagcacaaagctatctgcttctcagtcaaaaacatcaaacagcaaagtct 609
Query: 301 ccatcatttgctactgcaggaaaaagttccacagcttaactaatggtggcccatacaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ccatcatttgctactgcaggaaaaagttccacagcttaactaatggtggcccatacaaaa 549
Query: 361 ctgatcatttattctgcacagcagtttcaagcccttatgcataatacaaacatgagatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ctgatcatttattctgcacagcagtttcaagcccttatgcataatacaaacatgagatgt 489
Query: 421 cctcacatcatgtctaaaattatcctgtcctttcctatcttctctctatataactatcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cctcacatcatgtctaaaattatcctgtcctttcctatcttctctctatataactatcca 429
Query: 481 acccaggtgtccaaaccaaaaaaacttgactattttctttaaca 524
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 acccaggtgtccaaaccaaaaaaacttgactattttctttaaca 385
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
