Query= MSMg01no523_i22.b1 MSMg01no523_i22.b1 CHROMAT_FILE:
MSMg01no523_i22.b1 PHD_FILE: MSMg01no523_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:31 2005
(330 letters)
>mm_chr7_137920167_137920896
Length = 730
Score = 596 bits (308), Expect = e-175
Identities = 314/316 (99%)
Strand = Plus / Minus
Query: 15 aacatttttatgaatgacagtggagatgacacagcaggacagtgatgagcacctggaaga 74
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aacattttcatgaatgacagtggagatgacacagcaggacagtgatgagcacctggaaga 427
Query: 75 caaagagctgaagatgacactttcgtatgtctctaaagcatcccatcagaatactgtaga 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 caaagagctgaagatgacactttcgtatgtctctaaagcatcccatcagaatactgtaga 367
Query: 135 ggaggctgacctaaagagtccgtagtttaccataaaaggaatcatgagaaagcctcaaat 194
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggaggctgacctaaagagttcgtagtttaccataaaaggaatcatgagaaagcctcaaat 307
Query: 195 gtgggtcacgtgtcaaagccagaggatggctaagtatttgtttgttctgtacttggatgt 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gtgggtcacgtgtcaaagccagaggatggctaagtatttgtttgttctgtacttggatgt 247
Query: 255 agtgtctcatactacacaagagctctagcctgggatggatggatggatggatggatggat 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 agtgtctcatactacacaagagctctagcctgggatggatggatggatggatggatggat 187
Query: 315 ggatggatggatggat 330
||||||||||||||||
Sbjct: 186 ggatggatggatggat 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_i22.g1 MSMg01no523_i22.g1 CHROMAT_FILE:
MSMg01no523_i22.g1 PHD_FILE: MSMg01no523_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:31 2005
(496 letters)
>mm_chr7_137759441_137760339
Length = 899
Score = 911 bits (471), Expect = 0.0
Identities = 491/499 (98%), Gaps = 3/499 (0%)
Strand = Plus / Plus
Query: 1 caatgctcattctggaaaaggaaagccagaggcagagtggaagttaatgagttagaacgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgctcattctggaaaaggaaagccagaggcagagtggaagttaatgagttagaacgg 260
Query: 61 gcttaggagttaccaaccctgattcttatccagagactgggtgccatagtggggtgggga 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttagaagttaccaaccctgattcttatccagagactgggtgccatagtggggtgggga 320
Query: 121 taagggatgttgcccaggtccttgcattcttgccttgggtatcaaactaaagaccatctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 taagggatgttgcccaggtccttgcattcttgccttgggtatcaaactaaagaccttctc 380
Query: 181 aacccttatcagttctccacaaagacagacacttctgtgttgctctgccatgctctttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacccttatcagttctccacaaagacagacacttctgtgttgctctgccatgctctttgc 440
Query: 241 ttccttccaaccccttcatgaggagaaggaggtgacacccatctaattggtggattgaga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 ttccttccaaccccttcatgaggagaaggaggtgacacccatctaattggtgaattgaga 500
Query: 301 acagcagctctcactggtccagttttcccagggacagaatccagttattcagggccactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acagcagctctcactggtccagttttcccagggacagaatccagttattcagggccactg 560
Query: 361 agatgtaactggtattctgggacaagcccatcctt---ggaactctgcatgccagcagtc 417
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 agatgtaactagtattctgggacaagcccatccttcttggaactctgcatgccagcagtc 620
Query: 418 tagtctgggaagggatgccgaacaaggtgtggtataaggattgggtttaccatttattca 477
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 tagtctgggaagggatgccgaacaaggtgtggtataaggattggttttaccatttattca 680
Query: 478 ttcatctaactatccacct 496
|||||||||||||||||||
Sbjct: 681 ttcatctaactatccacct 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 899
Length adjustment: 10
Effective length of query: 486
Effective length of database: 889
Effective search space: 432054
Effective search space used: 432054
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
