Query= MSMg01no523_j20.b1 MSMg01no523_j20.b1 CHROMAT_FILE:
MSMg01no523_j20.b1 PHD_FILE: MSMg01no523_j20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:35 2005
(273 letters)
>mm_chr7_128058291_128058963
Length = 673
Score = 433 bits (224), Expect = e-126
Identities = 256/268 (95%), Gaps = 3/268 (1%)
Strand = Plus / Minus
Query: 4 ggaattcagtgataccccactgtctctgcctcctgagcactgacattaaaggcgtgtgtc 63
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 473 ggaattcagtgagaccccactgtctctgcctcctgagcactggcattaaaggcgtgtgtc 414
Query: 64 accgaaactctcaggttattcattctttctgagtcatttttggtattctggaatttgaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 accgaaactctcaggttattcattctttctgagtcatttttggtattctggaatttgaga 354
Query: 124 caaagcaaagccattcacttggcttttcacacttattaccatgaaaatctgagttctccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 353 caaagcaaagccattcacttggcttttcacacttattaccatgaaaatctgagctctccc 294
Query: 184 tcacgtgcactgtgcctttcgttattgtccctctccctctccctctccctctctccctct 243
||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 293 tcacgtgcactgtgcctttcgttattgtc---ctccctctccctctccctctccccctcc 237
Query: 244 ccctctccctctccctctccctctccct 271
||||| ||||| ||||| ||||| ||||
Sbjct: 236 ccctccccctccccctccccctccccct 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no523_j20.g1 MSMg01no523_j20.g1 CHROMAT_FILE:
MSMg01no523_j20.g1 PHD_FILE: MSMg01no523_j20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:35 2005
(309 letters)
>mm_chr7_127910554_127911262
Length = 709
Score = 582 bits (301), Expect = e-171
Identities = 307/309 (99%), Gaps = 1/309 (0%)
Strand = Plus / Plus
Query: 1 caaaatgacctcacagtaagtctctagcatgaggggcgcctctccagcctccagcttcca 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 caaaatgacctcacagtaagtctctagcatgaggggcacctctccagcctccagcttcca 260
Query: 61 cagcctcccggcctgcaggacaaacgtgctttgtttacagcaaatgctaaaacaggccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagcctcccggcctgcaggacaaacgtgctttgtttacagcaaatgctaaaacaggccca 320
Query: 121 ttcaccaaaaaaaaaaaaaaaaaaaaaagaacagttctcactcaattagcaccttttggg 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcac-aaaaaaaaaaaaaaaaaaaaaagaacagttctcactcaattagcaccttttggg 379
Query: 181 gggtgggagggggaaaagatccgtgtcaaattcagtgaaagctcaccacagactcatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gggtgggagggggaaaagatccgtgtcaaattcagtgaaagctcaccacagactcatttt 439
Query: 241 cacttgcagtgtgaacttctagtattcttcccacagcagaacctcccagccagacacctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cacttgcagtgtgaacttctagtattcttcccacagcagaacctcccagccagacacctg 499
Query: 301 caacccctg 309
|||||||||
Sbjct: 500 caacccctg 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
