Query= MSMg01no524_c13.b1 MSMg01no524_c13.b1 CHROMAT_FILE:
MSMg01no524_c13.b1 PHD_FILE: MSMg01no524_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:20 2005
(635 letters)
>mm_chr7_109117889_109118923
Length = 1035
Score = 1197 bits (619), Expect = 0.0
Identities = 630/635 (99%), Gaps = 3/635 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctttaactatcccaggaggtgtccagtgggtggcaacgctgtcgagatcttgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaattcctttaactatcccaggaggtgtccagtgggtggcaacgctgtcgagatcttgt 260
Query: 64 ctgagtgtgacatttcttttagtcatatagttgcagcagactctgaggatga---gtccc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 ctgagtgtgacatttcttttagtcatatagttgcagcagactctgaggatgatgagtccc 320
Query: 121 tgtgcctgttgagggctctagccagcgcctgccatactcagaactgtgccttggcccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgcctgttgagggctctagccagcgcctgccatactcagaactgtgccttggcccctc 380
Query: 181 ggcccctccccacaaatgcccacaggaacagcggattaggttctggcagcacagctggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcccctccccacaaatgcccacaggaacagcggattaggttctggcagcacagctggga 440
Query: 241 ttttggcggccattccagtcaacaatagcgcagctatcgggacagaagagcgaggcctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttggcggccattccagtcaacaatagcgcagctatcgggacagaagagcgaggcctac 500
Query: 301 gctccgcgcctagaaactgcctgggccgctcgtttgggtggaggagtgggaggagcaggc 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctccgcggctagaaactgcctgggccgctcgtttgggtggaggagtgggaggagcaggc 560
Query: 361 acacagcatggcatcttggccttgctacgcagaaggtaggggctgaagagattccctgcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acacagcatggcatcttggccttgctacgcagaaggtaggggctgaagagattccctgcg 620
Query: 421 gagaacaggctagggtggccaagtcctagggcgggcaggcgggcaggcaggcagggcgct 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 gagaacaggctagggtggccaagtcctagggcgggcaggcgggcgggcaggcagggcgct 680
Query: 481 ctgaggaggcctgcgctttgtgtggcggggagccggcgggcggccgtgcgcctgcagaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgaggaggcctgcgctttgtgtggcggggagccggcgggcggccgtgcgcctgcagaca 740
Query: 541 cgcccccctcgccgcgccgcaggaagctgcccctgtacaaggcctgcgccgtgcggctcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cgcccccctcgccgcgccgcaggaagctgcccctgtacaaggcctgcgccgtgcggctcc 800
Query: 601 cctgcgctcggctcccaggcttcctctgcgccggg 635
|||||||||||||||||||||||||||||||||||
Sbjct: 801 cctgcgctcggctcccaggcttcctctgcgccggg 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_c13.g1 MSMg01no524_c13.g1 CHROMAT_FILE:
MSMg01no524_c13.g1 PHD_FILE: MSMg01no524_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:20 2005
(659 letters)
>mm_chr7_109250771_109251826
Length = 1056
Score = 942 bits (487), Expect = 0.0
Identities = 524/547 (95%), Gaps = 20/547 (3%)
Strand = Plus / Minus
Query: 130 cacctcctagacgtcaagtgtgctagcatgtgcctgaagtctcagtattcacggagggaa 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 cacctcctagacgtcaagtgtgctagcatgtgcctgaagtctcagtattcacggagggaa 997
Query: 190 ggaggatcaggaatccaaggctacacagtgagttccaggccagaccgggatacacaagac 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 ggaggatcaggaatccaaggctacacagtgagttccaggccagaccgggatacacaagac 937
Query: 250 cctgtctccaaacaaagcagcagactgaagtaaaacgtctctctgcacccggtggccg-- 307
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 936 cctgtctccaaacaaagcagcagactgaagtaaaacatctctctgcacccggtggccgcc 877
Query: 308 t---ctca------------cctcagcctgctcctcgcctcagcctgctcaatgatcctg 352
| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 tcacctcagcctgctcctcgcctcagcctgctcctcgcctcagcctgctcaatgatcctg 817
Query: 353 ccccctgggacctttcccgtccctgcttggcgcctacagtacagaacaaagttccagaga 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 ccccctgggacctttcccgtccctgcttggcgcctacagtacagaacaaagttccagaga 757
Query: 413 ggctctgccatttccctgccctgagctgtccttctgacctcctcctcttccaggcctagc 472
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 756 ggctctgccatttccctgccctgagctgtc---ctgacctcctcctcttccaggcctagc 700
Query: 473 tcagggcccacctctttcagaaagccccagaatcctttgggggctctacatcactttgtg 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tcagggcccacctctttcagaaagccccagaatcctttgggggctctacatcactttgtg 640
Query: 533 ctgacttctcctgagcgccccaacccccacccctgacctgtgtaggaaccggcagtaatc 592
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 639 ctgacttctcctgagcgccccaagccccacccctgacctgtgtaggaaccggcagtaatc 580
Query: 593 cctgatctcaggccaggactaggcaaagtcaccggagtacttgctgatgaaggaagtaaa 652
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 579 cctgatctcaggccaggactaggcaaagtcacccgagtacttgctgatgaaggaagtaaa 520
Query: 653 atctaca 659
|||||||
Sbjct: 519 atctaca 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1056
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1046
Effective search space: 678854
Effective search space used: 678854
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
