Query= MSMg01no524_e20.b1 MSMg01no524_e20.b1 CHROMAT_FILE:
MSMg01no524_e20.b1 PHD_FILE: MSMg01no524_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:32 2005
(621 letters)
>mm_chr7_25376502_25377522
Length = 1021
Score = 940 bits (486), Expect = 0.0
Identities = 585/618 (94%), Gaps = 7/618 (1%)
Strand = Plus / Plus
Query: 8 ttccagggttcatagaaaggtacactgtggtgtctggacacagaacctcagcccc-taga 66
|||||||||||| |||||| | |||||||| | |||||| | ||||||||||||| | ||
Sbjct: 208 ttccagggttcagagaaagatgcactgtggcggctggactcggaacctcagccccat-ga 266
Query: 67 ttaacccccatggctgcttctctatgacaacctgcactgcgacttggtccactggaatag 126
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttaagccccgtggctgcttctctatgacaacctgcactgcgacttggtccactggaatag 326
Query: 127 agagtttgggtttcgtgtccctgtactgggaatgtgaaccagggctttgtgcatgttaca 186
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 327 agagtttgggtttcgtgtctctgtgctgggaatgtgaaccagggctttgtgcatgttaca 386
Query: 187 caagggctctgtggctaagccacacccttcactcttagcctaggagtgtccccactatcg 246
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 387 caagggctctgtggctaagccacacccttcacccttagcctaggagtgtccccactatcg 446
Query: 247 ataggattccaggagtgaaatgtttgatagcctgtgtgctaagataacgtaatttaccag 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ataggattccaggagtgaaatgtttgatagcctgtgtgctaagataacgtaatttaccag 506
Query: 307 atctgacattctttgtttttgagacagtttggtagg-taagagtgctggctagttttatg 365
||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 507 atctgacattctttgtttttgagacagtttggt-ggataggagtgctggctagttttatg 565
Query: 366 ccaacttgacacaatctagagtcatcaaagaggagggagatgcctccagaagatggagct 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ccaacttgacacaatctagagtcatcaaagaggagggagatgcctccagaagatggagct 625
Query: 426 gtaggcaagcctgaaggatatctttgtttaatttcatgtgctttgctgttttgccgg-ag 484
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 626 gtaggctagcctgaaggatatctttgtttaatttcatgtgctttgctgttttgcccgca- 684
Query: 485 tgtatgtctgtgtgagagcattggagcctctagaacggagctacagggagttgtgagctg 544
||||| |||| |||||||||||||||||||| |||| ||| ||||| |||| ||||||||
Sbjct: 685 tgtatatctgggtgagagcattggagcctctggaacagaggtacagagagtcgtgagctg 744
Query: 545 ccatgtggc-gctgggaattaaaccaggttcctctggaagagcagctagtgctcttaaaa 603
|||||||| |||||||||||||||||||| ||||||||||||||| || ||||||||||
Sbjct: 745 ccatgtgggtgctgggaattaaaccaggtttctctggaagagcagccagcgctcttaaaa 804
Query: 604 ccactgagccatctctcc 621
||||||||||||||||||
Sbjct: 805 ccactgagccatctctcc 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_e20.g1 MSMg01no524_e20.g1 CHROMAT_FILE:
MSMg01no524_e20.g1 PHD_FILE: MSMg01no524_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:32 2005
(585 letters)
>mm_chr7_25529882_25530866
Length = 985
Score = 1093 bits (565), Expect = 0.0
Identities = 579/584 (99%)
Strand = Plus / Minus
Query: 1 aaatccaagctgagctatctgagactgtcaaagagaaagcaagagtgagacaaagatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 aaatccaagctgagctatctgagactgtcaaagagaaagcaagagtgagacaaagatcaa 835
Query: 61 gagaaacagagaaaagaagggagggagggaggcaaagaaggagggaaggatgctgagtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 gagaaacagagaaaagaagggagggagggaggcaaagaaggagggaaggatgctgagtgc 775
Query: 121 ctgtgtcaggttctgctaagcctgagtcctgcagctctacagggaagtgggaaggagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ctgtgtcaggttctgctaagcctgagtcctgcagctctacagggaagtgggaaggagaga 715
Query: 181 gaagcaaagcccagggtgccaagtgtggtgtgaagggtagagtgtagagagaagcccagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gaagcaaagcccagggtgccaagtgtggtgtgaagggtagagtgtagagagaagcccagc 655
Query: 241 aggggagaggagatgctgatcagggtgaggctgcagcaaggtgcaggggctcagtgtgtg 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 654 aggggagaggagatgctgatcagggtgaggctgcagcatggtgcaggggctcagtgtgtg 595
Query: 301 gaggggcctggtaacagggtctgcaaggggcagcgcagagggagccagtctggagctggt 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 594 gaggggcctggtaacagggtctgcaaggggcagtgcagagggagccagtctggagctggt 535
Query: 361 ctttggcagattcaggatatgatctgtgctattgttcctgtggattgtagtctccctatg 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ctttggcagattcagaatatgatctgtgctattgttcctgtggattgtagtctccctatg 475
Query: 421 attgggaggggcccaagaacaaggctcccagtccttgcctttctccccttctgatcctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 attgggaggggcccaagaacaaggctcccagtccttgcctttctccccttctgatcctgg 415
Query: 481 tgttcactgtcactccccacaggacaaaaatcagccttcctggggagcaaaggctgcagc 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 414 tgttcactgtcactccccacaggacaaaaatcagccttcctggggagtaaaggctgcagc 355
Query: 541 agtcctggggcgcangacaatattggtgtctccatattctcccg 584
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 354 agtcctggggcgcaggacaatattggtgtctccatattctcccg 311
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
