Query= MSMg01no525_b10.b1 MSMg01no525_b10.b1 CHROMAT_FILE:
MSMg01no525_b10.b1 PHD_FILE: MSMg01no525_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:34 2005
(531 letters)
>mm_chr7_89333588_89334519
Length = 932
Score = 779 bits (403), Expect = 0.0
Identities = 444/467 (95%), Gaps = 16/467 (3%)
Strand = Plus / Plus
Query: 5 gaattcatctcatactttccttccagacctcgtaagctgcctctcacagagaggccttca 64
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcgtctcagactttccttccagacctcgtaagctgcctctcacagagaggccttca 264
Query: 65 gacaggcttgctatgtgacttgcgactgtttctgtgtgtgttctcccttcacggctgagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gacaggcttgctatgtgacttgcgactgtttctgtgtgtgttctcccttcacggctgagc 324
Query: 125 gtttacctcttagagagaccacagggttctagattcctgctggctgaaccctcacacgtg 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 gtttacctcttagagagaccacagggttctagattcctgctggctgaaccctcacatgtg 384
Query: 185 ccaggatgaaaattcacattttttt-cagttttatttataatgtggacatttaatttctt 243
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaggatgaaaattcacattttttttcagttttatttataatgtggacatttaatttctt 444
Query: 244 ttgagatcggctttttataagtgaagaagtaggagacaaaaaacctcctacttattcagg 303
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 445 ttgagatcggctttttataagtgaagaagtaggagacaaaaaaactcctacttattcagg 504
Query: 304 aaaaatgttttgcagtgacccagccattgcctaggtcttcatgattgtactaattagtct 363
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 505 aaaaatgttttgcagtgacccagccattgcctgggtcttcatgattgtactaattagtct 564
Query: 364 aactttgcaaaactgctgtgcagaatgttccagaggctgcagggtctctcaaatccttac 423
||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 565 aactttgcaaaactgctgtgcagaatgttccagaggc---------------atccttac 609
Query: 424 agtaactgtatcagggtctccttaaatccttccagtaactgtatcag 470
|||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 610 agtaactgtatcagggtctcctcaaatccttacagtaactgtatcag 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 932
Length adjustment: 10
Effective length of query: 521
Effective length of database: 922
Effective search space: 480362
Effective search space used: 480362
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_b10.g1 MSMg01no525_b10.g1 CHROMAT_FILE:
MSMg01no525_b10.g1 PHD_FILE: MSMg01no525_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:34 2005
(549 letters)
>mm_chr7_89515587_89516535
Length = 949
Score = 1035 bits (535), Expect = 0.0
Identities = 544/547 (99%)
Strand = Plus / Minus
Query: 3 tttaaagagaccactctataggtcctgggagggatagtatgtgtcaggagaccaccctat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tttaaagagaccactctataggtcctgggagggatagtatgtgtcaggagaccaccctat 585
Query: 63 aggtcttggaagaaacccatgctggaggggaacgctcgataggccctggaaggcatgctg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aggtcttggaagaaacccatgctggaggggaacgctcgataggccctggaaggcatgctg 525
Query: 123 gactgaggaagaacagtatgtaagtcctgactggaattccatgctgaggggaaaacactt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gactgaggaagaacagtatgtaagtcctgactggaattccatgctgaggggaaaacactt 465
Query: 183 cttttggagtctgcactttgatcccaaagtgaaacttgtattttcccacagcctctttac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cttttggagtctgcactttgatcccaaagtgaaacttgtattttcccacagcctctttac 405
Query: 243 cacagacactcccactgtctgtctggcagaggagaagcagctccaccatttaaatgaatt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cacagacactcccactgtctgtctggcagaggagaagcagctccaccatttaaatgaatt 345
Query: 303 acaaataactattttgttttatcaatgggatgagaggggaaatggcaaagggatgacccg 362
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 344 acaaataactattttgttttatcaaagggatgagaggggaaatggcaaagggatgacccg 285
Query: 363 agcatctaaacagatcttgagggttatatgtcccattatgtcagtcaatcgacatgtctt 422
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agcatctaaatagatcttgagggttatatgtcccattatgtcagtcaatcgacatgtctt 225
Query: 423 cagcataacctcaatgcagtgagtggctcacacctgcaattccagcacttggaaggctga 482
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 224 cagcataacctcaatgcagtgagtggctcacacctgcaattccagcacttgggaggctga 165
Query: 483 ggcaggacgataggaatgaatctgaatatgagctacagagtgagactttgtctctcaaaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ggcaggacgataggaatgaatctgaatatgagctacagagtgagactttgtctctcaaaa 105
Query: 543 agacata 549
|||||||
Sbjct: 104 agacata 98
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
