Query= MSMg01no525_k12.b1 MSMg01no525_k12.b1 CHROMAT_FILE:
MSMg01no525_k12.b1 PHD_FILE: MSMg01no525_k12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:21 2005
(510 letters)
>mm_chr7_77048102_77049012
Length = 911
Score = 957 bits (495), Expect = 0.0
Identities = 504/507 (99%), Gaps = 1/507 (0%)
Strand = Plus / Minus
Query: 5 gaattcaactatactatgcctcaattcctaggtctgttctt-aaaaaacaaaagcagaaa 63
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 542 gaattcaactatactatgcctcaattcctaggtctgttcttaaaaaaacaaaagcagaaa 483
Query: 64 acaaacaaacaaaaagacccccccaaaacaaaaacatagatgtgtctttgttttgaaaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 acaaacaaacaaaaagacccccccaaaacaaaaacatagatgtgtctttgttttgaaaat 423
Query: 124 atccctttgatgccatctgggcattgagtgctttggccttgttttgaaagactggcttct 183
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atccctttaatgccatctgggcattgagtgctttggccttgttttgaaagactggcttct 363
Query: 184 tgatgtgtggcagtgtgtcccgagatccctgaagatcttgatgagttatttcatggcttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgatgtgtggcagtgtgtcccgagatccctgaagatcttgatgagttatttcatggcttc 303
Query: 244 tatcacactcaacccatgaacacactctgcgcatatcacttctccataactataactcaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tatcacactcaacccatgaacacactctgcgcatatcacttctccataactataactcaa 243
Query: 304 tggcagagttgtttgtgttgaaccacaaactgtaggcatatgtatccactttcagggctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tggcagagttgtttgtgttgaaccacaaactgtaggcatatgtatccactttcagggctg 183
Query: 364 atcattgggtactggataaccaattggtatgctcttcccttgggaagactatttgtccta 423
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atcattaggtactggataaccaattggtatgctcttcccttgggaagactatttgtccta 123
Query: 424 ttctcagagtccctccattgccattagttctttgtctagggttgaagccccatcagattt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttctcagagtccctccattgccattagttctttgtctagggttgaagccccatcagattt 63
Query: 484 tctccttaggtgttagcaagtcttgtt 510
|||||||||||||||||||||||||||
Sbjct: 62 tctccttaggtgttagcaagtcttgtt 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 911
Length adjustment: 10
Effective length of query: 500
Effective length of database: 901
Effective search space: 450500
Effective search space used: 450500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_k12.g1 MSMg01no525_k12.g1 CHROMAT_FILE:
MSMg01no525_k12.g1 PHD_FILE: MSMg01no525_k12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:21 2005
(522 letters)
>mm_chr7_76913763_76914684
Length = 922
Score = 978 bits (506), Expect = 0.0
Identities = 518/522 (99%)
Strand = Plus / Plus
Query: 1 acagcactactcctgcctcagtttgccaagtgcaggtaccacttgtgtgagccatcacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagcactactcctgcctcagtttgccaagtgcaggtaccacttgtgtgagccatcacac 260
Query: 61 aagacaatttctactgattcaggagaggctgtgaagaagagactgtgtttgttcaggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagacaatttctactgattcaggagaggctgtgaagaagagactgtgtttgttcaggttt 320
Query: 121 ctggactggacataggctgggctattttctcgatgttggtaggtctacagattgtttgct 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 ctggactggacataggctgggctattttctcgatgttggtaggtctacaggttgtttgct 380
Query: 181 cagagggccccaaggattgtaaagatttcaatgacaatccttttgttcacagtttttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagagggccccaaggattgtaaagatttcaatgacaatccttttgttcacagtttttctt 440
Query: 241 tttgttgtggttttgttttgctgttttattttacaagtttctttccttcctctccaaaac 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgttgttgttttgttttgctgttttattttacaagtttctttccttcctctccaaaac 500
Query: 301 acagcaccacgttggaaatgtctggctcatcacagtgaaagggttcaggaggaacaacat 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acagcaccatgttggaaatgtctggctcatcacagtgaaagggttcaggaggaacaacat 560
Query: 361 ttgccccagatgggactttgctctagataattaatgacattgaaacttgccttggtcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgccccagatgggactttgctctagataattaatgacattgaaacttgccttggtcttt 620
Query: 421 tctctcaggatcggacaaactaacatgtgttaataaagtgtctttagaaaaataagaaac 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 tctctcaggatcggacaaactaacatgtgttaataaagtatctttagaaaaataagaaac 680
Query: 481 attaccaatactgctttagaaatatagatagggaagtctcaa 522
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attaccaatactgctttagaaatatagatagggaagtctcaa 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
