Query= MSMg01no527_d10.b1 MSMg01no527_d10.b1 CHROMAT_FILE:
MSMg01no527_d10.b1 PHD_FILE: MSMg01no527_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:22 2005
(638 letters)
>mm_chr7_142374042_142375081
Length = 1040
Score = 1149 bits (594), Expect = 0.0
Identities = 625/636 (98%), Gaps = 2/636 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaaattataaacatttaaaaaggactcaaagccaacaggcttccagaaacctca 64
|||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaagaataaacattttaaaaggactcaaagccaacaggcttccagaaacctca 264
Query: 65 tgaatttaggagaagacaaggaacagactttttgaaatccccatgacacaacagaga--c 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 265 tgaatttaggagaagacaaggaacagactttttgaaatccccatgacacaacagagactc 324
Query: 123 tctgcagaaactagactgatattccatctgtttcccggacaatacttttccatctgtgaa 182
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 tctgcagaaactagattgatattccatctgtttcccggacaatacttttccatctctgaa 384
Query: 183 tggctaacttgtatctccacctgtccttcaaccctgccataggcttcctatttcttccag 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 385 tggctaacttgtatctccacctgtccttcaaccctgccataggcttcctatttctttcag 444
Query: 243 gtctcagctcagttctcaggctccaggctgcacagatgaaagcccatagaataagtccat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtctcagctcagttctcaggctccaggctgcacagatgaaagcccatagaataagtccat 504
Query: 303 ggagaacccagagagccaagcagttaccacagtggtgcccatacagggagggagctatat 362
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 505 gaagaacccagagagccaagcagttaccacagtggtgcccgtacagggagggagctatat 564
Query: 363 atcaaggcataagaaagaaagaaggggcttggtgtctgtcacttcccctgctttcctaat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atcaaggcataagaaagaaagaaggggcttggtgtctgtcacttcccctgctttcctaat 624
Query: 423 acctctccatcagccagaagtccccttcttcccctctacttggtggcaacacacttgaga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acctctccatcagccagaagtccccttcttcccctctacttggtggcaacacacttgaga 684
Query: 483 ccttccacaaattctcctacttctcctggagaagtggtatcacctcccactgccatctga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccttccacaaattctcctacttctcctggagaagtggtatcacctcccactgccatctga 744
Query: 543 ttgtagaaggaacctacatggttctttcacaggggtagaggcagccctaatgcaggaaga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttgtagaaggaacctacatggttctttcacaggggtagaggcagccctaatgcaggaaga 804
Query: 603 atctatctgtatacactatagctttagcacaggcgg 638
||||||||||||| ||||||||||||||||||||||
Sbjct: 805 atctatctgtatatactatagctttagcacaggcgg 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1040
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1030
Effective search space: 646840
Effective search space used: 646840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_d10.g1 MSMg01no527_d10.g1 CHROMAT_FILE:
MSMg01no527_d10.g1 PHD_FILE: MSMg01no527_d10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:23 2005
(531 letters)
>mm_chr7_142543017_142543947
Length = 931
Score = 559 bits (289), Expect = e-163
Identities = 307/317 (96%), Gaps = 8/317 (2%)
Strand = Plus / Minus
Query: 1 catgaagacagttgtacagtgatgaactgggtagagacttcttggggattgctagaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 catgaagacagttgtacagtgatgaactgggtagagacttcttggggattgctagaaaag 254
Query: 61 ggttgtgagatgctgtctgtcccagcagacatgcaatactatgacaatccactgggctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggttgtgagatgctgtctgtcccagcagacatgcaatactatgacaatccactgggctat 194
Query: 121 ggatgtcaggtggttgtgcaggtccatctagcaggccagcgagtcttcaaacattcttgt 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 193 ggatgtcaggtggttgtgcaggtccatctagcaggtcagcgagtcttcaaacattcttgt 134
Query: 181 atctatttcttcagatcaataggaatgcatcaccataatgagcacaccctactgtgtcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atctatttcttcagatcaataggaatgcatcaccataatgagcacaccctactgtgtcag 74
Query: 241 ga----cttttatgtctttggagtcattgtgggctctaggtaatcacaggccaattcctt 296
|| | |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 73 gaccccc----atgtctttggagtcattgtgggctctaggtaatcacaggctaattcctt 18
Query: 297 aacctctttctatcaga 313
|||||||||||||||||
Sbjct: 17 aacctctttctatcaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
