Query= MSMg01no528_b18.b1 MSMg01no528_b18.b1 CHROMAT_FILE:
MSMg01no528_b18.b1 PHD_FILE: MSMg01no528_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:37 2005
(701 letters)
>mm_chr7_6470688_6471788
Length = 1101
Score = 1220 bits (631), Expect = 0.0
Identities = 670/697 (96%), Gaps = 23/697 (3%)
Strand = Plus / Minus
Query: 5 gaattcactactgggaattgaacatgcaagccaagccctcgaacccaccaggccacctca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gaattcactactgggaattgaacatgcaagccaagccctcgaacccaccaggccacctca 762
Query: 65 cagtttcattcatgatagacatcacttctagatgtggtactgcacagccatggtctggga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 cagtttcattcatgatagacatcacttctagatgtggtactgcacagccatggtctggga 702
Query: 125 ctggcttaattgcaggcctatgtgaagaaggtgggaccagcatttaccactaagttgagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ctggcttaattgcaggcctatgtgaagaaggtgggaccagcatttaccactaagttgagt 642
Query: 185 gtgagaagccagcatgcagcataaaaaaaaaaaaaaaaaaaaaaaaaagaaagaaagaaa 244
|||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 641 gtgagaagccagcatgcagc-------aaaaaaaaaaaaaaaaaaaaagaaag------- 596
Query: 245 aaaaagaaaaaagaaaagcaagtgtgaatgtgtgggaaattataaatatgttctaaggaa 304
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ---------aaagaaaagcaagtgtgaatgtgtgggaaattataaatatgttctaaggaa 545
Query: 305 aaggagcatgaaaacactggctgtcttcagatgctcaaaagagtacttgtgagtttcaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aaggagcatgaaaacactggctgtcttcagatgctcaaaagagtacttgtgagtttcaag 485
Query: 365 gtaaagttgctcagctatctggtaaatattgattcttcacttgtaatgagccaggcattg 424
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 484 gtaaagttgttcagctatctggtaaatattgattcttcacttttaatgagccaggcattg 425
Query: 425 tcttaggttccggggacattgtgtaagaaaagcaaagggatacacatgcaacacatacag 484
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 424 tcttaggttccggggacattgtgtaagaaaagcaaagagatacacatgcaacacatacag 365
Query: 485 ctgtggaaatgtctgatgctacatgtagagcctacacatagaaccggctagaatgtcact 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ctgtggaaatgtctgatgctacatgtagagcctacacatagaaccggctagaatgtcact 305
Query: 545 ctataacacccttctgcgcgcaccccccttctgaagaaaggtgcccctctgtctgcccaa 604
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctataatacccttctgcgcgcaccccccttctgaagaaaggtgcccctctgtctgcccaa 245
Query: 605 gcattagaagttgaggaacaggtctcacttttccatttaaaacttggatccaacatcagt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gcattagaagttgaggaacaggtctcacttttccatttaaaacttggatccaacatcagt 185
Query: 665 ttttgctacagtatctggttacagtatcaactcaaaa 701
|||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttttgctacagtatctggttacagtatcaactcaaaa 148
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1101
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1091
Effective search space: 753881
Effective search space used: 753881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_b18.g1 MSMg01no528_b18.g1 CHROMAT_FILE:
MSMg01no528_b18.g1 PHD_FILE: MSMg01no528_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:37 2005
(237 letters)
>mm_chr7_6282787_6283423
Length = 637
Score = 211 bits (109), Expect = 3e-59
Identities = 112/113 (99%)
Strand = Plus / Plus
Query: 1 tgtctcttcccttccggtcgtcagaaccagaactcactcaggctgcgcaggagctgcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtctcttcccttccggtcgtcagaaccagaactcactcaggctgcgcaggagctgcttg 260
Query: 61 ctctcctcggtctcttacacgaggagtcgggggtgggggtagttgtggtggtg 113
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctcctcggtctcttagacgaggagtcgggggtgggggtagttgtggtggtg 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
