Query= MSMg01no528_d05.b1 MSMg01no528_d05.b1 CHROMAT_FILE:
MSMg01no528_d05.b1 PHD_FILE: MSMg01no528_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:44 2005
(688 letters)
>mm_chr7_63893252_63894339
Length = 1088
Score = 787 bits (407), Expect = 0.0
Identities = 439/457 (96%), Gaps = 12/457 (2%)
Strand = Plus / Minus
Query: 5 gaattcctcaaatgtgtgccgtgcatagacctattagctttcaggtttgcaaagtgggta 64
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 445 gaattcctcaaatgtgtgccgtgcatagacctattagcttccaggtttgcaaagtgggta 386
Query: 65 gaactgaagagttggccctgacctctagatgaggcttgtctggatggatctttaaagtct 124
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 385 gaactgaagagttggccctgacctctagatgaggcttgtctggatgggtctttaaagtct 326
Query: 125 gagtctcctcctcaggtaatattgctttctttagtcagggaatgtttgattcacaggatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagtctcctcctcaggtaatattgctttctttagtcagggaatgtttgattcacaggatg 266
Query: 185 acttctgcaacttagcctttgaaagagtgcccatcgttcagttgctgttctgactggccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acttctgcaacttagcctttgaaagagtgcccatcgttcagttgctgttctgactggc-- 208
Query: 245 tgtggcaaagccttatgttatttaaagctctcccaggactccttacagaatcaggtattg 304
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ----------ccttatgttatttaaagctctcccaggactccttacagaatcaggtattg 158
Query: 305 acctctcaaactgggactgaacattgaaagccagattgaaagacatggctaattgaacca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 acctctcaaactgggactgaacattgaaagccagattgaaagacatggctaattgaacca 98
Query: 365 gtatgcatggagtggtacatagcaattattcagtgagcttaggttcaagattctcctatt 424
|||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||
Sbjct: 97 gtatgcatggagtggtgcatagcaattattcagtgagcttgggtgcaagattctcctgtt 38
Query: 425 cacacatcctcatttgtcaattcaggagactttgcct 461
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 cacacatcctcatttgtcaattcaggagactttgcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space: 730884
Effective search space used: 730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_d05.g1 MSMg01no528_d05.g1 CHROMAT_FILE:
MSMg01no528_d05.g1 PHD_FILE: MSMg01no528_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:44 2005
(239 letters)
>mm_chr7_63719001_63719641
Length = 641
Score = 373 bits (193), Expect = e-108
Identities = 213/221 (96%), Gaps = 4/221 (1%)
Strand = Plus / Plus
Query: 22 tggggggtggggtagaaaagctaatgattccaaacaaagttaaacatctgaagattcaga 81
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tggggggaggggtagaaaagctaatgattccaaacaaagttaaacatctgaagattcaga 281
Query: 82 atttccccaaaagtagatcgccacaaaaaaagtga---aaaaaaaaatccaagaaacaaa 138
||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 282 atttcccaaaaagtagatcgccac-aaaaaagtgaaggaaaaaaaaatccaagaaacaaa 340
Query: 139 actgtgggaggcagcctgccttggtaagaggaagttcatctgatggtatgaggagcagct 198
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tctgtgggaggcagcctgcgttggtaagaggaagttcatctgatggtatgaggagcagct 400
Query: 199 gagaagaaagctgcaaagacagggagtctgagagggctgag 239
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gagaagaaagctgcaaagacagggagtctgagagggctgag 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 641
Length adjustment: 9
Effective length of query: 230
Effective length of database: 632
Effective search space: 145360
Effective search space used: 145360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
