Query= MSMg01no528_e13.b1 MSMg01no528_e13.b1 CHROMAT_FILE:
MSMg01no528_e13.b1 PHD_FILE: MSMg01no528_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:50 2005
(684 letters)
>mm_chr7_144982395_144983478
Length = 1084
Score = 806 bits (417), Expect = 0.0
Identities = 441/449 (98%), Gaps = 1/449 (0%)
Strand = Plus / Minus
Query: 237 catgtttagtgactttcttatgaagttcaggcacataggcag-aggatggtaatgcccac 295
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1084 catgtttagtgactttcttatgaagttcaggcacataggcagaaggatggtgatgcccac 1025
Query: 296 actgggctgggccttcctacagcaataagtgatcaagacaatccctcaaagtcaggcccc 355
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1024 actgggctgggccttcctacagcaataagtgatcaagacaatccctcaaagtaaggcccc 965
Query: 356 caagccaactggatctaggcgatccctcaactgagattctcaggtgattctaggctgggt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 caagccaactggatctaggcgatccctcaactgagattctcaggtgattctaggctgggt 905
Query: 416 tgagttagcagttaaagctaagacaataccatgggcaggatgtggtttttcaagccaggc 475
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 904 tgaattagcagttaaagctaagacaataccatgggcaggatgtggtttttaaagccaggc 845
Query: 476 tattgcctgacacttattcccaccaccagcataggatgataaaaggcaaagtttatactt 535
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tattgcctgacactcattcccaccaccagcataggatgataaaaggcaaagtttatactt 785
Query: 536 gccctgcatctcagcaccattgaccagaaaacaccaacttccacagctcaagtgcagggt 595
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 784 gccctgcatctcagcaccattgaccagaaaacaccaatttccacagctcaagtgcagggt 725
Query: 596 gttaaaaacccagcttcaaagcccctgctattcctgattagatgctcagcacccagacca 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gttaaaaacccagcttcaaagcccctgctattcctgattagatgctcagcacccagacca 665
Query: 656 tgtaaggacctcatatagttgccagttcc 684
|||||||||||||||||| ||||||||||
Sbjct: 664 tgtaaggacctcatatagctgccagttcc 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space: 723876
Effective search space used: 723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_e13.g1 MSMg01no528_e13.g1 CHROMAT_FILE:
MSMg01no528_e13.g1 PHD_FILE: MSMg01no528_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:50 2005
(681 letters)
>mm_chr7_144804560_144805640
Length = 1081
Score = 1232 bits (637), Expect = 0.0
Identities = 670/681 (98%)
Strand = Plus / Plus
Query: 1 tctggtccatcagcactaggttgaaatagctgaggtaaacagccctgtgaactgagcaac 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggtccgtcagcactaggttgaaatagctgaggtaaacagccctgtgaactgagcaac 260
Query: 61 cacaggctgctcggcctctctggcatgaaacagattgttggactactctgagcatattgt 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacagggtgctcggcctctctggcatgaaacagattgttggactactctgagcatattgt 320
Query: 121 gtaaataaaccgatgaattccctattggtaaatatccaatattcatcctatctgttcggt 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 gtaaataaaccgatgaattccctattggtatatatccaatattcatcctatctgttcggt 380
Query: 181 tcctctagagaatcctgactaatgcactgaggatggaggttgagcgcaccctcacttctg 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 tcctctagagaatcctgactaatgcacttaggatggaggttgagcgcaccctcacttctg 440
Query: 241 tgtggaggacagccagggccattcaggtgcttacaaaggtgctatgtgcagcatgaagct 300
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 441 tgtggaggacagccagggccattcaggtgctaacaaaggtgctatgtgcagtatgaagct 500
Query: 301 tgaggaaagccagagtgctgtgcttgagtcatccgtgcttgcaatgacgagtccaggacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaggaaagccagagtgctgtgcttgagtcatccgtgcttgcaatgacgagtccaggacc 560
Query: 361 agggttctgaaaggaagggcagctccttgttagtgcagctgcacctgtgacaatgagctc 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 agggttctgaaaggaagggcagctccttggtagtgcagctgcacctgtgacaatgagctc 620
Query: 421 cagcacacaggcccacgtgggtccttctcaaagactgactcacctaccagatccagtgga 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 cagcacacaggcccacgtgggtccttctcaaagactgactcacctactagatccagtgga 680
Query: 481 gaccctttgatcttttctccttcttctggtcctgatcccaaccatcatatcccatggaag 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 gaccctttgatcttttctccttcttctggtcctgatcccaaccatcacatcccatggaag 740
Query: 541 ggagagggtgagtaggagggtcagagtgggaggaggctagtgatgtgtctcaaggaatca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggagagggtgagtaggagggtcagagtgggaggaggctagtgatgtgtctcaaggaatca 800
Query: 601 ctgggttgcatcagggatctctgccttgtgggatggcttcggaaactccatgactgggga 660
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 801 ctgggttgcatcagggatctctgccttgtgggatggcttcggaagctccctgactgggga 860
Query: 661 caaccttgggctgttgttctt 681
|||||||||||||||||||||
Sbjct: 861 caaccttgggctgttgttctt 881
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
