Query= MSMg01no528_l01.b1 MSMg01no528_l01.b1 CHROMAT_FILE:
MSMg01no528_l01.b1 PHD_FILE: MSMg01no528_l01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:21 2005
(652 letters)
>mm_chr7_104358950_104360001
Length = 1052
Score = 1245 bits (644), Expect = 0.0
Identities = 650/652 (99%)
Strand = Plus / Plus
Query: 1 agatgtttgcttataaattgtaatgttcatgctactatagatttgatagttgtaagaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatgtttgcttataaattgtaatgttcatgctactatagatttgatagttgtaagaaag 260
Query: 61 actatatgccctaaaatgtttactgtcagccctttacaggaaactttaatgataagtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actatatgccctaaaatgtttactgtcagccctttacaggaaactttaatgataagtatt 320
Query: 121 gtaccctaggctgtctctttttcagaatttttagtattaaagattctctaattttcatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaccctaggctgtctctttttcagaatttttagtattaaagattctctaattttcatag 380
Query: 181 agtatctaagaaaatccttagtaattcaagaagaatcgttttatttagtataatacttaa 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcatctaagaaaatccttagtaattcaagaagaatcgttttatttagtataatacttaa 440
Query: 241 ggcagaacaaaagagtctagaattttagaagtactttcaattttcagggctgaagctaaa 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 ggcagaacaaaagagtctagaattttagaagtactttcagttttcagggctgaagctaaa 500
Query: 301 aggatcttcagaaagttcctttttccttaaaagacaatttacctataagaactagcctag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggatcttcagaaagttcctttttccttaaaagacaatttacctataagaactagcctag 560
Query: 361 ttcaacttgattatgtagactaacctaaaacaaaccaggttcttgtcccatatgtaaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcaacttgattatgtagactaacctaaaacaaaccaggttcttgtcccatatgtaaagc 620
Query: 421 agcctttatgtttagaacccatattcatgaccccagggaatctccctggagactgatatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agcctttatgtttagaacccatattcatgaccccagggaatctccctggagactgatatg 680
Query: 481 gtagaattttataagctcttcaccaccaacaaaatacttataatgtgatttagtcatcgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtagaattttataagctcttcaccaccaacaaaatacttataatgtgatttagtcatcgt 740
Query: 541 aagtctcagtggaggcttattttatttttctggttgccaaagagcaatagaaggaagtca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagtctcagtggaggcttattttatttttctggttgccaaagagcaatagaaggaagtca 800
Query: 601 tgaccttgttctgtgcgcacttacagacctaacctaaaggacagacaggatc 652
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgaccttgttctgtgcgcacttacagacctaacctaaaggacagacaggatc 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_l01.g1 MSMg01no528_l01.g1 CHROMAT_FILE:
MSMg01no528_l01.g1 PHD_FILE: MSMg01no528_l01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:21 2005
(624 letters)
>mm_chr7_104544616_104545640
Length = 1025
Score = 853 bits (441), Expect = 0.0
Identities = 463/473 (97%), Gaps = 6/473 (1%)
Strand = Plus / Minus
Query: 153 tgggacttgaaacaatttgtctttacagtgtgtacatgtgtacatgtgccatgggactct 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 tgggacttgaaacaatttgtctttacagtgtgtacatgtgtacatgtgccatgggactct 966
Query: 213 tgaggtggacagaggacaatcttagggagtttgattccttgacccggtgggttctgggga 272
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 cgaggtggacagaggacaatcttagggagtttgattccttgacccggtgggttctgggga 906
Query: 273 tcaaatgagggttgtcaagcttggtgacacatgctgttacacactggaccatctcacatg 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tcaaatgagggttgtcaagcttggtgacacatgctgttacacactggaccatctcacatg 846
Query: 333 cctgattttttttttttttttaaatcacagagtggtgtgtgtttgtaatctgagcacctg 392
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 cctga-----tttttttttttaaatcacagagtggtgtgtgtttgtaatctgagcacctg 791
Query: 393 ggaggcggaagcaggatgattgggagtttgagagcgttctcaggtacttactgagccagc 452
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ggaggcagaagcaggatgattgggagtttgagagcgttctcaggtacttactgagccagc 731
Query: 453 ctcggcaatgagagattgcctctaagaacaataacaaaaagagcccctccccccacttga 512
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ctcagcaatgagagattgcctctaagaacaataacaaaaagagcccctccccccacttga 671
Query: 513 acaatgtagagagaccctgggtcaacagacaaacacgtgagtgctgaggaccgagggtct 572
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 acaatgtagagagacactgggtcaacagacaaacacgtgagtgctgaggaccgagggtct 611
Query: 573 cattctggcgaggacagctagttagatggggaag-aataagaaaagagagggc 624
|||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 610 cattctggcgaggacagctagttagatggggaagaaataagaaaagagagggc 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1025
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1015
Effective search space: 623210
Effective search space used: 623210
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
