Query= MSMg01no529_b10.b1 MSMg01no529_b10.b1 CHROMAT_FILE:
MSMg01no529_b10.b1 PHD_FILE: MSMg01no529_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:54 2005
(675 letters)
>mm_chr7_127298663_127299737
Length = 1075
Score = 524 bits (271), Expect = e-153
Identities = 298/307 (97%), Gaps = 1/307 (0%)
Strand = Plus / Minus
Query: 1 aaatgagctgttaaggtcacctatatggaaacaatattccttttatacagagatctcaca 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aaatgagctgttacggtcacctatatggaaacaatattccttttatacagagatctcaca 247
Query: 61 tgaggatgctaaagtggcaaagagacatgcttagggcctaggcatgtgtgatggtttgta 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tgaggatgctaaagtggcaatgagacatgcttagggcctaggcatgtgtgatggtttgta 187
Query: 121 tatgcttgtcctaacgaggggcactatttggaggtgtggccttgtaggagtaggtgtgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 186 tatgcttgtcctaacgaggggcactatttggaggtgtggccttgtaggagtgggtgcgtc 127
Query: 181 actgtgggtatgggctttaagaccctactcctagctgcctgaaagccagtattctgctag 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 actgtgggtgtgggctttaagaccctactcctagctgcctgaaagccagtattctgctag 67
Query: 241 cagctattcagatgaagacgtagaactctccactcctcctgcatcatgcctgcctggatg 300
|||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 66 cagc-cttcagatgaagaggtagaactctccactcctcctgcatcatgcctgcctagatg 8
Query: 301 ctgccat 307
|||||||
Sbjct: 7 ctgccat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_b10.g1 MSMg01no529_b10.g1 CHROMAT_FILE:
MSMg01no529_b10.g1 PHD_FILE: MSMg01no529_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:54 2005
(616 letters)
>mm_chr7_127126901_127127916
Length = 1016
Score = 1108 bits (573), Expect = 0.0
Identities = 606/617 (98%), Gaps = 3/617 (0%)
Strand = Plus / Plus
Query: 1 ttggccagctttggctacatagtgagaccctatctcaaaaacaaaacaaataaaaaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttggccagctttggctacatagtgagaccctatctcaaaaacaaaacaaataaaaaaata 261
Query: 61 aaaaacaacaaccaaaaggtttgaggctgtagctcagtgacagaccactgatctaagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 262 aaaaacaacaaccaaaaggtttgaggctgtagctcagtgacagaccactgacct-agcat 320
Query: 121 cctcaaagcctggcttggatcctccacactgactgcaacaacagagttttaaaatggaca 180
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 321 cctcaaagcctggcttggatcctccacactgacagcaacgacagagttttaaaatggaca 380
Query: 181 tataccattttacaagtatgataaaagataatgataagtccacaggataaagtacatttt 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 tataccattttacaagtatgataaaagatgatgataagtccacaggataaagtacatttt 440
Query: 241 gaaaactaaagtacctataacaggttgatgtgaacaaaaatattttttcatcatttttct 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 gaaaactaaagtacctataacaggttgatgtgaacaaaaat-ttttttcatcatttttct 499
Query: 301 ttgagaggtttcctttataagaaaataagagatactaaaaacatgtatcagtaacatatt 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttgagaggtttccttgataagaaaataagagatactaaaaacatgtatcagtaacatatt 559
Query: 361 ttt-tccttcccttgtgggctagtttgtggtttcattcaagaacatttaggccaaagaac 419
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttctccttcccttgtgggctagtttgtggtttcattcaagaacatttaggccaaagaac 619
Query: 420 aaagctttaaataaaatggacctaccagctatgtaatttggccagcactcccattttgca 479
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaagatttaaataaaatggacctaccagctatgtaatttggccagcactcccattttgca 679
Query: 480 catctgtgcagtggatctgagtttacgctaagcctagaaaatcatggtggagagtgactg 539
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 680 catctgtgcagtggatctgagtttacgctaagcctagaaaatcacggtggagagtgactg 739
Query: 540 agctctatctgtcaagcatttgaagggcctgggcacacaggaagctgtctgccaacacta 599
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 740 agctctatctgtcaagcatttgaagggcctgggcacacaggaagctgtctgctaacacta 799
Query: 600 agttccaagcttctcct 616
|||||||||||||||||
Sbjct: 800 agttccaagcttctcct 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
