Query= MSMg01no529_h09.b1 MSMg01no529_h09.b1 CHROMAT_FILE:
MSMg01no529_h09.b1 PHD_FILE: MSMg01no529_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:26 2005
(645 letters)
>mm_chr7_83619070_83620114
Length = 1045
Score = 1052 bits (544), Expect = 0.0
Identities = 570/580 (98%), Gaps = 4/580 (0%)
Strand = Plus / Minus
Query: 67 acacacacacacacacacacacacacacacacacacacacacgccaaacaaacaaacaaa 126
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 918 acacacacacacacacacacacacacacacatacacacacatgccaaacaaacaaacaaa 859
Query: 127 caaacaaaaaaaccc-aaaaaaatcaaaaacaaaaaacactgaattagcccaagatttga 185
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 ca---aaaaaaacccaaaaaaaatcaaaaacaaaaaacactgaattagcccaagatttga 802
Query: 186 atcaggtgccacctacccctgtttctttttcagtttaaaatactcccaggggatccattt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atcaggtgccacctacccctgtttctttttcagtttaaaatactcccaggggatccattt 742
Query: 246 aagcatcagtcactggaaactggagattcatcccgattttatttccagtttccagcagca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagcatcagtcactggaaactggagattcatcccgattttatttccagtttccagcagca 682
Query: 306 atcagcatcctcagaggctaaggctgattgtctagctgctgaaccctcagcatagctcat 365
||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||
Sbjct: 681 atcagcatcctcagaggctaaggctgattctctagctgctgaaccctcaacatcgctcat 622
Query: 366 cattctcaaggatgcataaatccctatcttttgcaatgccagtcttcctttcacttgtca 425
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 621 cattctcaaggatgcataaatccctatcttttgccatgccagtcttcctttcacttgtca 562
Query: 426 cagtgctaatgataagagttatttatgttgaacattgaacaaaatgggtttttttactca 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtgctaatgataagagttatttatgttgaacattgaacaaaatgggtttttttactca 502
Query: 486 atgttccagcctgatgatcctgcctgggggagacagtgacagctctgtcaaagcatccca 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgttccagcctgatgatcctgcctgggggagacagtgacagctctgtcaaagcatccca 442
Query: 546 gggtaaagggagacctgctggtctttctaattagggctttaccctgtcagtttcctgaat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggtaaagggagacctgctggtctttctaattagggctttaccctgtcagtttcctgaat 382
Query: 606 agccacttctaaacgggaagcgcatcactacacgttgagg 645
||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agccacttctaaacgggaagcgcatcactacacgttgagg 342
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_h09.g1 MSMg01no529_h09.g1 CHROMAT_FILE:
MSMg01no529_h09.g1 PHD_FILE: MSMg01no529_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:26 2005
(606 letters)
>mm_chr7_83459447_83460452
Length = 1006
Score = 1151 bits (595), Expect = 0.0
Identities = 604/607 (99%), Gaps = 1/607 (0%)
Strand = Plus / Plus
Query: 1 cattcagattttcccagacccaggattgatatctactattaaattaatcattctaacttc 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 200 cattcagattttcccagacccagaattgatatctactattaaattaatcattctaacttc 259
Query: 61 aaaaaaaaaa-gcttggaaggttggccaaagtttcatctctgctggagaagagggataaa 119
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaaaaaaaaaagcttggaaggttggccaaagtttcatctctgctggagaagagggataaa 319
Query: 120 gtagcctccattcgtactatattgctcctttgaagcaattaaaaagtagttatttattta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtagcctccattcgtactatattgctcctttgaagcaattaaaaagtagttatttattta 379
Query: 180 tttttatgtatatggtgttctgtctgcatagatataatgcagaacatttttgtagtgccc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttttatgtatatggtgttctgtctgcatagatataatgcagaacatttttgtagtgccc 439
Query: 240 gtggaggtcagaaaagagtattagattctctgggactggaattacagatggttgtgaacc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtggaggtcagaaaagagtattagattctctgggactggaattacagatggttgtgaacc 499
Query: 300 actatgtgggtgctaggaatcaaacttgggtcctctgacaagaacagtacttttaaccac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 actatgtgggtgctaggaatcaaacttgggtcctctgacaagaacagtacttttaaccac 559
Query: 360 catcacatctctgtagtccctcaaatagggttttcatgaaggactctagagagggatggc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catcacatctctgtagtccctcaaatagggttttcatgaaggactctagagagggatggc 619
Query: 420 tcatgtgtgtgcagcctgtattgctggccacaggtcaaaggaactggggtctggtgattt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcatgtgtgtgcagcctgtattgctggccacaggtcaaaggaactggggtctggtgattt 679
Query: 480 aatatataacatatggccagctacatcctagctggaaaatacaataggaacatgcaagac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aatatataacatatggccagctacatcctagctggaaaatacaataggaacatgcaagac 739
Query: 540 aaggatgttctcagggagtactcatgggccctgtaacagagcaggcaattctttatgggg 599
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 740 aaggatgttctcagggagtactcgtgggccctgtaacagagcaggcaattctttatgggg 799
Query: 600 agaaatt 606
|||||||
Sbjct: 800 agaaatt 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
