Query= MSMg01no529_p01.b1 MSMg01no529_p01.b1 CHROMAT_FILE:
MSMg01no529_p01.b1 PHD_FILE: MSMg01no529_p01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:05 2005
(593 letters)
>mm_chr7_140255420_140256412
Length = 993
Score = 973 bits (503), Expect = 0.0
Identities = 571/597 (95%), Gaps = 10/597 (1%)
Strand = Plus / Plus
Query: 5 gaattctcctctg--ttcgttctctccagaacattctatgctgctgggtgacttct-ggg 61
||||||||||||| | |||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 199 gaattctcctctgaat--gttctcaccagaacattctatgctgctgggtgacttctgggg 256
Query: 62 ggagaggtatttaaagacatagaaacaggagaaaaagcaacgacaatgaccacaattagc 121
|||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||
Sbjct: 257 ggagaggtatttaaagacatagaaacgggaggaaaagcaatgacaatgaccacaattagc 316
Query: 122 aatgcacttcttaagagatccccagacatcgatatgtggagtttataaacgttcaatcat 181
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 317 aatgcacttcttaagagatccccagacatcgatatgtggagtttataaatgttcaatcat 376
Query: 182 ttattccttgtaagaccccttttctttcattttaggggctgagtgtggagtgagccgtgt 241
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 377 ttattccttgtaagaccccttttctttcattttaggggctgagtgtggagtgagccttgt 436
Query: 242 tcgcaccaggtaagtgctctgccatacgttacacctgcggccctaactcctcacac---- 297
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 437 tcgcaccaggtaagtgctttgccatacgttatacctgcggccctaactcctcacactcta 496
Query: 298 tccatcctcctgcctccactta-ctaagcactgggaccacaggcctggcgcaaatcacct 356
|||||||||||||||||||||| | ||||||||| |||| |||||||| |||||||||||
Sbjct: 497 tccatcctcctgcctccacttaccaaagcactggaaccaaaggcctggggcaaatcacct 556
Query: 357 ggtttatgtggtgctggagtcgaacccaggactccacgcatgctaggtaagcactctacg 416
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggtttatgtggtgctggactcgaacccaggactccacgcatgctaggtaagcactctacg 616
Query: 417 ctgagcgtcagcttcagccctgcttgcttagttctacaagcctatgaggcagaaggaaga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ctgagcgtcagcttcagccctgcttgcttagttctacaagcctatgaggcagaaggaaga 676
Query: 477 aaactgcggcagagaagaggagcgcggtcatcctcccaaggtagcagagccaacacatag 536
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 677 aaactgcggcagagaagaggagcgcggtcatcctcccaaggtagccgagccgacacatag 736
Query: 537 gtgggcttgagcccaggcagctgccagtgaggggataaggtttgaccgagacatgaa 593
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 737 gtgggcttgagcccaggcagctgccagtgaggggatgaggtttgaccgagacatgaa 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_p01.g1 MSMg01no529_p01.g1 CHROMAT_FILE:
MSMg01no529_p01.g1 PHD_FILE: MSMg01no529_p01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:05 2005
(340 letters)
>mm_chr7_140426319_140427056
Length = 738
Score = 563 bits (291), Expect = e-165
Identities = 328/341 (96%), Gaps = 5/341 (1%)
Strand = Plus / Minus
Query: 1 tgtaaggaagcaggctaagcaaaccgggagaaacaagccacttagcagcacttccccatg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 729 tgtaaggaagcaggctaagcaaaccaggagaaacaagccacttagcagcacttccccatg 670
Query: 61 gcttctgcatccgctcctgaccccagatccccaggctgtttaggtccctgccttgccttc 120
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 669 gcttctgcatcagctcctgaccccagatccccaggctgtttaagtccctgccttgccttc 610
Query: 121 ccttagtggaatgtgacgtctgatagataagccgagttaaaccgttccctcccccagact 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 609 ccttagtggaatgtgacgtctgatagataagccgagt-aaaccgttccctcccccagact 551
Query: 181 tgcttttggtcagaggagatttttggtggtgttttttgggttttagttttggtttttggt 240
|||||||||||||||||||||||||||| |||||| ||| ||| |||||||||||||||
Sbjct: 550 tgcttttggtcagaggagatttttggtgttgtttt--ggggtttggttttggtttttggt 493
Query: 241 tttt-ggttttttctcacaataacagaaatgagactggaatagacagaaagtaacaaagc 299
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tttttggttttt-ctcacaataacagaaatgagactggaatagacagaaagtaacaaagc 434
Query: 300 aagacattgaatgtcttcctctgggttctgcacatgcgcag 340
|||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 433 aagacactgaatgtcttcctctggtttctgcacatgcgcag 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 738
Length adjustment: 9
Effective length of query: 331
Effective length of database: 729
Effective search space: 241299
Effective search space used: 241299
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
