Query= MSMg01no530_b08.b1 MSMg01no530_b08.b1 CHROMAT_FILE:
MSMg01no530_b08.b1 PHD_FILE: MSMg01no530_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:17 2005
(719 letters)
>mm_chr7_38385309_38386424
Length = 1116
Score = 1355 bits (701), Expect = 0.0
Identities = 711/715 (99%), Gaps = 3/715 (0%)
Strand = Plus / Plus
Query: 5 gaattcagctagtaagcacggagacagggttcaatttagtttgtgaatcctttaattgtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagctagtaagcacggagacagggttcaatttagtttgtgaatcctttaattgtt 264
Query: 65 gtgcagctaattaaagaaggttccttacactcgcaagtgtttaccattcctagtatgcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgcagctaattaaagaaggttccttacactcgcaagtgtttaccattcctagtatgcat 324
Query: 125 acatgaaaaattaaattgtgccttcaagggctgagaactatagaaaaatcatagctaagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acatgaaaaattaaattgtgccttcaagggctgagaactatagaaaaatcatagctaagg 384
Query: 185 ctgcaacatgcttaccggctcaaaatagctgcttttcacaattggaatttgtaaaacttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgcaacatgcttaccggctcaaaatagctgcttttcacaattggaatttgtaaaacttt 444
Query: 245 ttgctaagcaaatatagagctaattagaagtgttcgttggaccaattaacatttaaataa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgctaagcaaatatagagctaattagaagtgttcgttggaccaattaacatttaaataa 504
Query: 305 ataagccatattgcacatttcacagtctttatttaatgatgcttctaactctttggaaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ataagccatattgcacatttcacagtctttatttaatgatgcttctaactctttggaaag 564
Query: 365 attctcttaagtacaaataagttgtcataaaaatgaaagataaaaataaccccataacag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attctcttaagtacaaataagttgtcataaaaatgaaagataaaaataaccccataacag 624
Query: 425 tctatgctatttcccccccgtttgccttgaagtccctcactaaaattctgtacctattat 484
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctatgctatttcccccca-tttgccttgaagtccctcactaaaattctgtacctattat 683
Query: 485 tgaagaagggggaaaaaaaaaccaacacacctcccacccacagatttcactccttctcgc 544
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgaagaagggggaaaaaaa--ccaacacacctcccacccacagatttcactccttctcgc 741
Query: 545 cacttccctggttaccttcccccgtctttgaatagaaacagagaagcacattttattact 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 cacttccctggttaccttcccccgtctttgaatagaaacagagaagcacattttattact 801
Query: 605 atttaaattgctatgataattctgtttacttaccgattttaccccacaatacaaaaatct 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 atttaaattgctatgataattctgtttacttaccgattttaccccacaatacaaaaatct 861
Query: 665 gtttcagaaaatcccacttcaatctgagaacatgcgtaagcaaggaaagggtggt 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 gtttcagaaaatcccacttcaatctgagaacatgcgtaagcaaggaaagggtggt 916
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 719
Length of database: 1116
Length adjustment: 10
Effective length of query: 709
Effective length of database: 1106
Effective search space: 784154
Effective search space used: 784154
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no530_b08.g1 MSMg01no530_b08.g1 CHROMAT_FILE:
MSMg01no530_b08.g1 PHD_FILE: MSMg01no530_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:17 2005
(559 letters)
>mm_chr7_38530787_38531745
Length = 959
Score = 1081 bits (559), Expect = 0.0
Identities = 559/559 (100%)
Strand = Plus / Minus
Query: 1 tcctttgccagctccagtgagacaggcaagaatgttatgggtggttgagagaaactgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tcctttgccagctccagtgagacaggcaagaatgttatgggtggttgagagaaactgtca 550
Query: 61 gatacactaaattcctgggattcatacgggcagtgttattccagggtagggacagcctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gatacactaaattcctgggattcatacgggcagtgttattccagggtagggacagcctgt 490
Query: 121 cttattgttcaagtgcattacagatacatttggcattgggctacagagcctttgatccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cttattgttcaagtgcattacagatacatttggcattgggctacagagcctttgatccag 430
Query: 181 cctcaccgccccccccactcccgtttgagagccttgtcttacatttgattgttcacattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cctcaccgccccccccactcccgtttgagagccttgtcttacatttgattgttcacattt 370
Query: 241 gaaaaaaaaaaaaaagaatcatttaaccctccactggaatgtggatcctgaaatgcagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gaaaaaaaaaaaaaagaatcatttaaccctccactggaatgtggatcctgaaatgcagat 310
Query: 301 tgaaaagatgacatttgtttttgctaacaagaagcgggcagcccaactgtgccgagcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgaaaagatgacatttgtttttgctaacaagaagcgggcagcccaactgtgccgagcttg 250
Query: 361 gaaagtcagagcgatttattttcactttgatgaaatcagatctcttaaaaaaaacaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gaaagtcagagcgatttattttcactttgatgaaatcagatctcttaaaaaaaacaaaaa 190
Query: 421 caaaaaaaaaaacacaaaactgccttgggtttgttaagaatggcaactagaggcagccgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 caaaaaaaaaaacacaaaactgccttgggtttgttaagaatggcaactagaggcagccgg 130
Query: 481 aacatcatgcatgggatgggttttatcattctgtaaacagacatcctgagcacctattaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aacatcatgcatgggatgggttttatcattctgtaaacagacatcctgagcacctattaa 70
Query: 541 atgttctgctgtctgcaga 559
|||||||||||||||||||
Sbjct: 69 atgttctgctgtctgcaga 51
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
