Query= MSMg01no530_i21.b1 MSMg01no530_i21.b1 CHROMAT_FILE:
MSMg01no530_i21.b1 PHD_FILE: MSMg01no530_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:55 2005
(671 letters)
>mm_chr7_74971163_74972233
Length = 1071
Score = 1263 bits (653), Expect = 0.0
Identities = 665/671 (99%), Gaps = 4/671 (0%)
Strand = Plus / Plus
Query: 1 agtttctccagtcgttgctccatttctgttctttgaatctgtgatctaggcacgtgactt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtttctccagtcattgctccatttctgttctttgaatctgtgatctaggcacgtgactt 260
Query: 61 tcccccccactccgtctagccagcggctcaacaacagtccatgaaccttctctgacacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcccccccactccgtctagccagcggctcaacaacagtccatgaaccttctctgacacag 320
Query: 121 ctgtttccaatatgccacaggctagcgatttttattttctgaaaggacacaaagtaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtttccaatatgccacaggctagcgatttttattttctgaaaggacacaaagtaaata 380
Query: 181 tttcaggtcttggttagacctaccaggctttgccattatagcttgatgtagccacagaca 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcaggtcttgcttagacctaccaggctttgccattatagcttgatgtagccacagaca 440
Query: 241 atgaatacggctctttttgctcttgttgtccaataaaaacaaaacaaaacaaaacaaaac 300
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 atgaatacggctctttttgctcttgttgtccaataa----aaaacaaaacaaaacaaaac 496
Query: 301 aaaaacgttatttacaagtaagtgataggctggacctgggttatagattgcagttcatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aaaaacgttatttacaagtaagtgataggctggacctgggttatagattgcagttcatca 556
Query: 361 agtcttactataaaacatcaaaaccaaatatagttggctctccatcaggcctactcaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 agtcttactataaaacatcaaaaccaaatatagttggctctccatcaggcctactcaata 616
Query: 421 ggctattaatgaactctctggcttccttcaaaacgatcttatgtaaaacccatgcatgcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggctattaatgaactctctggcttccttcaaaacgatcttatgtaaaacccatgcatgcg 676
Query: 481 gaattttctatatttacttcgaaagctgcttcgagacacagccagagctgttctgccgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gaattttctatatttacttcgaaagctgcttcgagacacagccagagctgttctgccgca 736
Query: 541 tttctgtatagattcactatactttgtcaactcaaagcagtaattagggtctgcgtattc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tttctgtatagattcactatactttgtcaactcaaagcagtaattagggtctgcgtattc 796
Query: 601 atgctctcctttcatgaaaaccacatgctggccgtgagggtacgcccgtccgagtgcttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 atgctctcctttcatgaaaaccacatgctggccgtgagggtacgcccgtccgagtgcttg 856
Query: 661 ctcctcaatgc 671
|||||||||||
Sbjct: 857 ctcctcaatgc 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no530_i21.g1 MSMg01no530_i21.g1 CHROMAT_FILE:
MSMg01no530_i21.g1 PHD_FILE: MSMg01no530_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:55 2005
(593 letters)
>mm_chr7_75174047_75175039
Length = 993
Score = 1085 bits (561), Expect = 0.0
Identities = 585/593 (98%)
Strand = Plus / Minus
Query: 1 tcacaccctgagtggcccagctatgtaagatgggtgggttttgttggtttttgtttttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tcacaccctgagtggcccagctatgtaagatgggtgggttttgttggtttttgtttttaa 734
Query: 61 acctggcaatcctcttcaccttgttcagaaccccaggtttcctcaagagaaacattttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 733 acctggcaatcctcttcaccttgttcagaaccccaggtttcctcaagagaaccattttgt 674
Query: 121 ccttttcccctctctgagtcccgggaccccatggcctgcgccagcccatctctagaacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ccttttcccctctctgagtcccgggaccccatggcctgcgccagcccatctctagaacac 614
Query: 181 atgggtggaaagaatggccacagagcgagacctagaaagttgcttctgccatcagaacag 240
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 613 atgggtggaaagaatggccacagagcaagacctagaaaattgcttctgccatcagaacag 554
Query: 241 agcccttgctttttggtactgcatcctatgttaaaggaggcacaagacagagccagtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agcccttgctttttggtactgcatcctatgttaaaggaggcacaagacagagccagtgaa 494
Query: 301 ccttttgctcccacatggaccctagaaatgaagccaacacacagacaggcaggcaggacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ccttttgctcccacatggaccctagaaatgaagccaacacacagacaggcaggcaggacc 434
Query: 361 atggagaacccctgactcacctgagaactgtcctgagactctgccattacgagacccaat 420
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 433 atggagaacccctgactcacctgaggactgtcctgagactctgccgttacgagacccaat 374
Query: 421 gttattgtcacataaaccaatgagttttcttcatgcaacacatgtccaaagggcctgcaa 480
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 373 gttattgtcacataaaccaatgagttttcttcatgcaacacacgtccaacgggcctgcaa 314
Query: 481 aaccctacttggacttgcaggagtagatgagacttggggcagctacttctcatggtgcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aaccctacttggacttgcaggagtagatgagacttggggcagctacttctcatggtgcag 254
Query: 541 gagggtgcgtatacatggggacatttcagtgaacagctccctagtctctgaaa 593
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gagggtgcgtatgcatggggacatttcagtgaacagctccctagtctctgaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
