Query= MSMg01no531_c06.b1 MSMg01no531_c06.b1 CHROMAT_FILE:
MSMg01no531_c06.b1 PHD_FILE: MSMg01no531_c06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:41 2005
(401 letters)
>mm_chr7_52785194_52785993
Length = 800
Score = 712 bits (368), Expect = 0.0
Identities = 394/404 (97%), Gaps = 6/404 (1%)
Strand = Plus / Minus
Query: 1 agggcgcctgagctacctgtcctggacttccctcatgaacccccaaaccatctccccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 agggcgcctgagctacctgtcctggacttccctcatgaacccccaaaccatctccccaat 364
Query: 61 acaccaggaatgggcatccaggcaagtccctccccgcccagccagggacttacccagttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acaccaggaatgggcatccaggcaagtccctccccgcccagccagggacttacccagttc 304
Query: 121 tggtgtcctggtgacaggatctgtcaccacctcttttttgtgcctctcagaatggtctcc 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 303 tggtgtcctggtgacaggatctgtcaccacctc-tttttgtgcctctcagaatggtctcc 245
Query: 181 ctcttcacctgatatctgctttcttctctgtctcacttgtgagttctttctctccctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ctcttcacctgatatctgctttcttctctgtctcacttgtgagttctttctctccctctc 185
Query: 241 tctgtctctcccctgcgtctctctgtctatctctgtgtctgtctctctctgtgtctctgt 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tctgtctctcccctgc--atctctgtctatctctgtgtctgtctctctctgtgtctctgt 127
Query: 301 ctctctccctct-cccccccacccctgtctctctcagtgtctctctgtctcccccctgtg 359
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 126 ctctctccctctccccccccacccctgtctctctcggtgtctctctgtctcccccctgtg 67
Query: 360 tctctctgtctctctcc--ctctctctctctacccctctcctcc 401
||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 66 tctctctgtctctctccctctctctctctctacccctctcctcc 23
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 800
Length adjustment: 9
Effective length of query: 392
Effective length of database: 791
Effective search space: 310072
Effective search space used: 310072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_c06.g1 MSMg01no531_c06.g1 CHROMAT_FILE:
MSMg01no531_c06.g1 PHD_FILE: MSMg01no531_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:41 2005
(445 letters)
>mm_chr7_52588256_52589100
Length = 845
Score = 853 bits (441), Expect = 0.0
Identities = 444/445 (99%)
Strand = Plus / Plus
Query: 1 gggcgtgccctaagcagggtggcccaaaacaagggcagggggaggggtctgtctcaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggcgtgccctaagcagggtggcccaaaacaagggcagggggaggggtctgtctcaagtg 260
Query: 61 aaggcgggaaggtccttagtgggcggggtctgagtgtgttgagccgagacttctgtggtg 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 aaggcgggaaggtccttagtgggcggggtctgagtgtgttgagctgagacttctgtggtg 320
Query: 121 ggtggggtgtgtctgtgcaccaagacctcctgcggtaggcagtgaaggtcagtctgtggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtggggtgtgtctgtgcaccaagacctcctgcggtaggcagtgaaggtcagtctgtggt 380
Query: 181 gggcacccttgtctgcgttgagtggggcgagtccagtctatgggggcggagcctgtctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcacccttgtctgcgttgagtggggcgagtccagtctatgggggcggagcctgtctgc 440
Query: 241 agtggggcagggcccgcgaacctacgctgccaggtcagcagccccgaactgctcaccccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtggggcagggcccgcgaacctacgctgccaggtcagcagccccgaactgctcaccccg 500
Query: 301 catcatcggagaggtccactatgaacgtcgtgcacaccttcttcctgaagatcttaggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catcatcggagaggtccactatgaacgtcgtgcacaccttcttcctgaagatcttaggga 560
Query: 361 tccagctctgagaaccggaacaagaagggcagggcagggagtcgagtcagacccacagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccagctctgagaaccggaacaagaagggcagggcagggagtcgagtcagacccacagga 620
Query: 421 ttcgaagacaaccccgcgcgcccac 445
|||||||||||||||||||||||||
Sbjct: 621 ttcgaagacaaccccgcgcgcccac 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
