Query= MSMg01no532_e01.b1 MSMg01no532_e01.b1 CHROMAT_FILE:
MSMg01no532_e01.b1 PHD_FILE: MSMg01no532_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:08 2005
(558 letters)
>mm_chr7_80598170_80599127
Length = 958
Score = 1064 bits (550), Expect = 0.0
Identities = 556/558 (99%)
Strand = Plus / Plus
Query: 1 aaaaggttcaaacagttcaagtacaaaaatatacttaacattaaagatgacgacagtata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaggttcaaacagttcaagtacaaaaatatacttaacattaaagatgacgacagtata 260
Query: 61 acacctgaaaattacgaatctaaactcagaaaaagcttaaaatattgttgatctagccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacctgaaaattacgaatctaaactcagaaaaagcttaaaatattgttgatctagccaa 320
Query: 121 tcaaagtatgatctagcttgtctctagaacttagtatttcatgtatcacattcctgccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaagtatgatctagcttgtctctagaacttagtatttcatgtatcacattcctgccat 380
Query: 181 actatctacagagtgatactgtatacttgaaatactattgtataaaaagaccaaatggaa 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 actatctacagagtgatactgtatacttgaaatactattgtataaaaataccaaatggaa 440
Query: 241 gtgcagtgatttttttcatgtaagttttacttattgtgcacacatgcacacagaacacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgcagtgatttttttcatgtaagttttacttattgtgcacacatgcacacagaacacag 500
Query: 301 ctagggaggacctaagcagcagcccacacaaaggctggctatgcaagctggttataagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 ctagggaggacctaagcagcagcccacacaaaggctggctatgcaagctggttttaagct 560
Query: 361 taggttttctcttttctgactcctcatcctggggaggtaaagaaaagaaacttccaatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taggttttctcttttctgactcctcatcctggggaggtaaagaaaagaaacttccaatgg 620
Query: 421 attcattagcaacttggggtttttcagtgagccagtgtaatcaaaactgaagtccaattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attcattagcaacttggggtttttcagtgagccagtgtaatcaaaactgaagtccaattt 680
Query: 481 ctgaaattagtttggaatgcaacagcccgctcctggaatccattatcacagccacccagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgaaattagtttggaatgcaacagcccgctcctggaatccattatcacagccacccagt 740
Query: 541 cagatacctaaacatgag 558
||||||||||||||||||
Sbjct: 741 cagatacctaaacatgag 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_e01.g1 MSMg01no532_e01.g1 CHROMAT_FILE:
MSMg01no532_e01.g1 PHD_FILE: MSMg01no532_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:08 2005
(507 letters)
>mm_chr7_80634162_80635066
Length = 905
Score = 930 bits (481), Expect = 0.0
Identities = 500/507 (98%), Gaps = 2/507 (0%)
Strand = Plus / Minus
Query: 1 actaccagctattgagtgcaagcccactgttagctccatgtgactctctgcctcagaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 actaccagctattgagtgcaagcccactgttagctccatgtgactctctgcctcagaaag 646
Query: 61 cataaatcagaacaaagtctcaaagccacatgagtgaagtatatgatgtatgtagtctga 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 645 cataaatcagaacaaagtctcaaagccacatgagtgaagtatatgacgtatgtagtctga 586
Query: 121 catgccttaaacgcagtctgtgatagtagaagcatcggttttagttcttactcaagccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 catgccttaaacgcagtctgtgatagtagaagcatcggttttagttcttactcaagccaa 526
Query: 181 ggtgcctctgaaggtactctggtttatttctgttagataaattgtataggacagatacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ggtgcctctgaaggtactctggtttatttctgttagataaattgtataggacagatacat 466
Query: 241 agtatatatatattcatttggctgacttaaaattgtctagtgttgctcagtgacaactta 300
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ag--tatatatattcatttggctgacttaaaattgtctagtgttgctcagtgacaactta 408
Query: 301 ggacaaagtctaaattggttcgtttagtttggaagactgtagagagctggaccctaggtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 407 ggacaaagtctaaattggttcgtttagtttggaagactgtagagagctggaccctgggtc 348
Query: 361 atattggctcataactcttgtcccactacgcattatggatcagctgtccttgccatcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 atattggctcataactcttgtcccactacgcattatggatcagctgtccttgccatcttt 288
Query: 421 ctgtctctcacatgctgagccattcctgctctgttcatctggaatgttgcccctctctgt 480
|||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 287 ctgtctctcacacgctgagccattcctgctctgttcatctggaatgttgcttctctctgt 228
Query: 481 gttgacctggcactcacctcttttctt 507
|||||||||||||||||||||||||||
Sbjct: 227 gttgacctggcactcacctcttttctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 905
Length adjustment: 10
Effective length of query: 497
Effective length of database: 895
Effective search space: 444815
Effective search space used: 444815
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
