Query= MSMg01no532_i15.b1 MSMg01no532_i15.b1 CHROMAT_FILE:
MSMg01no532_i15.b1 PHD_FILE: MSMg01no532_i15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:29 2005
(563 letters)
>mm_chr7_101285323_101286286
Length = 964
Score = 1060 bits (548), Expect = 0.0
Identities = 560/564 (99%), Gaps = 1/564 (0%)
Strand = Plus / Plus
Query: 1 agcaggaagagaatgacaaatcaggtgtagctcaaacatctgaaaccacaaagcccacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcaggaagagaatgacaaatcaggtgtagctcaaacatctgaaaccacaaagcccacac 260
Query: 61 ccagtgacacacctacttcaacaaggccacacttcctaacagtgccactctttatgggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagtgacacacctacttcaacaaggccacacttcctaacagtgccactctttatgggac 320
Query: 121 tatggaggccaattttattcaaacttccacaacttcatccatgatgaaggcaaattactt 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 tatggaggccaattttattcaaacttccacaacttcatccatgataaaggcaaattactt 380
Query: 181 tagaacatgcatcaaattgctaattatatgtatgatccttttattaatattgatctcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaacatgcatcaaattgctaattatatgtatgatccttttattaatattgatctcagc 440
Query: 241 ttactagaatatagtaagttatgttgtttctggatgttctcacagtgaatattataatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttactagaatatagtaagttatgttgtttctggatgttctcacagtgaatattataatga 500
Query: 301 atacttaataaacagttattgaataaatgaatgtatttttatcctgtttttgtcaatgaa 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgcttaataaacagttattgaataaatgaatgtatttttatcctgtttttgtcaatgaa 560
Query: 361 accaagtaatatacacacctgctatgacataatatctagaatggttaaaagaaagagatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accaagtaatatacacacctgctatgacataatatctagaatggttaaaagaaagagatt 620
Query: 421 aagatcacataatattttagcaccgttt-actttctcttgattttaaggattcttcacaa 479
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 621 aagatcacataatattttagcacctttttactttctcttgattttaaggattcttcacaa 680
Query: 480 cccacaaatatgttgcctgagagattgctgaagctatttgccattttatgcaggtgtgtg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cccacaaatatgttgcctgagagattgctgaagctatttgccattttatgcaggtgtgtg 740
Query: 540 tcctaaaaatgtttttaatttagc 563
||||||||||||||||||||||||
Sbjct: 741 tcctaaaaatgtttttaatttagc 764
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 964
Length adjustment: 10
Effective length of query: 553
Effective length of database: 954
Effective search space: 527562
Effective search space used: 527562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_i15.g1 MSMg01no532_i15.g1 CHROMAT_FILE:
MSMg01no532_i15.g1 PHD_FILE: MSMg01no532_i15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:29 2005
(657 letters)
>mm_chr7_101480447_101481502
Length = 1056
Score = 1201 bits (621), Expect = 0.0
Identities = 645/653 (98%), Gaps = 1/653 (0%)
Strand = Plus / Minus
Query: 5 gggagactacttacattactttcaaaggagagagaaccaaactgtatctctaagtgactg 64
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 856 gggagactacttacattactttcaaaggagagagaaccaagctgtatctctaagtgactg 797
Query: 65 ctgcttctgaagaatcacaattaactcattatgcaatggacaagcttttcatccagtgaa 124
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||
Sbjct: 796 ctgcttctgaagaatcacaattaactcactatgcaatggacaagc-tttcatccaatgaa 738
Query: 125 ttgtgtctaaatttggactttgcttataagtagctgggtaaattaaccactcttaaattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ttgtgtctaaatttggactttgcttataagtagctgggtaaattaaccactcttaaattt 678
Query: 185 ctgtaaagcctggataatggtaagctccaggagtttttgtggggcaagaaatgttaaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ctgtaaagcctggataatggtaagctccaggagtttttgtggggcaagaaatgttaaagg 618
Query: 245 ttgcctcagaatcaggaacaatgcaaatattcaaatatgttgattcctctccctacttct 304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 617 ttgcctcagaatcaggaacaatgcaaatattcaaatatgttgattcctcttcctacttct 558
Query: 305 tgaaaaatagaatatcataaatctctgtggcaaactatttatttctctgtcctctccttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgaaaaatagaatatcataaatctctgtggcaaactatttatttctctgtcctctccttg 498
Query: 365 tggcaatgtgatataaataaatcacaactacttagaagttatttcaaggtcaagcattta 424
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 497 tggcaatgtgatgtaaataaatcacaactacttagaagttatttcaaggtcaagcagtta 438
Query: 425 acagtaagtcattacttatgtttttcttttagtaaatgattatcagaacaaatcattatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 acagtaagtcattacttatgtttttcttttagtaaatgattatcagaacaaatcattatg 378
Query: 485 tgacctttttttggctacagtgatccaataaaacttacattagccagactttcaggtaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tgacctttttttggctacagtgatccaataaaacttacattagccagactttcaggtaca 318
Query: 545 ttagtctaatgtgctttcagagattgcctaatctgagcagtgtaataagtttgtgtgaaa 604
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 317 ttagtctaatgtgctttcagagattgcctaatctgaacagtgtaataagtttgtgtgaaa 258
Query: 605 agcataaagcatgtaatatataataaaatttggactttaatgagccatcttgg 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 agcataaagcatgtaatatataataaaatttggactttaatgagccatcttgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1056
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1046
Effective search space: 676762
Effective search space used: 676762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
