Query= MSMg01no532_k13.b1 MSMg01no532_k13.b1 CHROMAT_FILE:
MSMg01no532_k13.b1 PHD_FILE: MSMg01no532_k13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:38 2005
(640 letters)
>mm_chr7_101285294_101286334
Length = 1041
Score = 1193 bits (617), Expect = 0.0
Identities = 632/637 (99%), Gaps = 1/637 (0%)
Strand = Plus / Plus
Query: 5 gaattctatatctgtatcgaaatacagcaggaagagaatgacaaatcaggtgtagctcaa 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatatctggatcgaaatacagcaggaagagaatgacaaatcaggtgtagctcaa 264
Query: 65 acatctgaaaccacaaagcccacacccagtgacacacctacttcaacaaggccacacttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acatctgaaaccacaaagcccacacccagtgacacacctacttcaacaaggccacacttc 324
Query: 125 ctaacagtgccactctttatgggactatggaggccaattttattcaaacttccacaactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctaacagtgccactctttatgggactatggaggccaattttattcaaacttccacaactt 384
Query: 185 catccatgatgaaggcaaattactttagaacatgcatcaaattgctaattatatgtatga 244
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catccatgataaaggcaaattactttagaacatgcatcaaattgctaattatatgtatga 444
Query: 245 tccttttattaatattgatctcagcttactagaatatagtaagttatgttgtttctggat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tccttttattaatattgatctcagcttactagaatatagtaagttatgttgtttctggat 504
Query: 305 gttctcacagtgaatattataatgaatacttaataaacagttattgaataaatgaatgta 364
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 505 gttctcacagtgaatattataatgaatgcttaataaacagttattgaataaatgaatgta 564
Query: 365 tttttatcctgtttttgtcaatgaaaccaagtaatatacacacctgctatgacataatat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttttatcctgtttttgtcaatgaaaccaagtaatatacacacctgctatgacataatat 624
Query: 425 ctagaatggttaaaagaaagagattaagatcacataatattttagcaccgttt-actttc 483
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 625 ctagaatggttaaaagaaagagattaagatcacataatattttagcacctttttactttc 684
Query: 484 tcttgattttaaggattcttcacaacccacaaatatgttgcctgagagattgctgaagct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcttgattttaaggattcttcacaacccacaaatatgttgcctgagagattgctgaagct 744
Query: 544 atttgccattttatgcaggtgtgtgtcctaaaaatgtttttaatttagcttttatacata 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atttgccattttatgcaggtgtgtgtcctaaaaatgtttttaatttagcttttatacata 804
Query: 604 tttattgtgcacgtatgtatatgaatgtgttttgttt 640
|||||||||||||||||||||||||||||||||||||
Sbjct: 805 tttattgtgcacgtatgtatatgaatgtgttttgttt 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1041
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1031
Effective search space: 649530
Effective search space used: 649530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_k13.g1 MSMg01no532_k13.g1 CHROMAT_FILE:
MSMg01no532_k13.g1 PHD_FILE: MSMg01no532_k13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:38 2005
(657 letters)
>mm_chr7_101480447_101481502
Length = 1056
Score = 1201 bits (621), Expect = 0.0
Identities = 645/653 (98%), Gaps = 1/653 (0%)
Strand = Plus / Minus
Query: 5 gggagactacttacattactttcaaaggagagagaaccaaactgtatctctaagtgactg 64
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 856 gggagactacttacattactttcaaaggagagagaaccaagctgtatctctaagtgactg 797
Query: 65 ctgcttctgaagaatcacaattaactcattatgcaatggacaagcttttcatccagtgaa 124
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||
Sbjct: 796 ctgcttctgaagaatcacaattaactcactatgcaatggacaagc-tttcatccaatgaa 738
Query: 125 ttgtgtctaaatttggactttgcttataagtagctgggtaaattaaccactcttaaattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ttgtgtctaaatttggactttgcttataagtagctgggtaaattaaccactcttaaattt 678
Query: 185 ctgtaaagcctggataatggtaagctccaggagtttttgtggggcaagaaatgttaaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ctgtaaagcctggataatggtaagctccaggagtttttgtggggcaagaaatgttaaagg 618
Query: 245 ttgcctcagaatcaggaacaatgcaaatattcaaatatgttgattcctctccctacttct 304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 617 ttgcctcagaatcaggaacaatgcaaatattcaaatatgttgattcctcttcctacttct 558
Query: 305 tgaaaaatagaatatcataaatctctgtggcaaactatttatttctctgtcctctccttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgaaaaatagaatatcataaatctctgtggcaaactatttatttctctgtcctctccttg 498
Query: 365 tggcaatgtgatataaataaatcacaactacttagaagttatttcaaggtcaagcattta 424
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 497 tggcaatgtgatgtaaataaatcacaactacttagaagttatttcaaggtcaagcagtta 438
Query: 425 acagtaagtcattacttatgtttttcttttagtaaatgattatcagaacaaatcattatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 acagtaagtcattacttatgtttttcttttagtaaatgattatcagaacaaatcattatg 378
Query: 485 tgacctttttttggctacagtgatccaataaaacttacattagccagactttcaggtaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tgacctttttttggctacagtgatccaataaaacttacattagccagactttcaggtaca 318
Query: 545 ttagtctaatgtgctttcagagattgcctaatctgagcagtgtaataagtttgtgtgaaa 604
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 317 ttagtctaatgtgctttcagagattgcctaatctgaacagtgtaataagtttgtgtgaaa 258
Query: 605 agcataaagcatgtaatatataataaaatttggactttaatgagccatcttgg 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 agcataaagcatgtaatatataataaaatttggactttaatgagccatcttgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1056
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1046
Effective search space: 676762
Effective search space used: 676762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
