TCCCCTATTTTTTATTCTAATCXXXXXXXXXXXXXXXXXXXXXXXXXXTT
TCCAGGATCCGCGGAATTCCAAATTACTTTGCATTCAACAACTTGAATAT
GAAAGCTATTTCTGAAAGAAAGAGAGAAACGGAGTGAGACAGACAGTACA
TAAAACTATCTTTCAATTATTTTTCAAAGAAGAAAAATACGAAATATTAT
TTGTTATTGTTTTCTAAATAATTTCCCCGAAATTTTAACTTTTGATTTTG
AAATTAATTTCAAAAATTTTTAAACTTTATTTTAAAATTATGCAAATTTA
TAATATAATAACTTACTCTCACACCAAAATTAACCAGACTCAAAGACTGT
ATAGCTCAATGAACTGCTATAGAGCTATATTAGCCATTCAAGAGAGCGAG
CTGTGTCATTTACCTTGAATCTGACACATTCACTATCTAACGTATTTTTC
ATATACTTTCTTACCACCAAAATTGATTACTCTCGGTCAATCACAATCAC
AAATACTACCTTATTTATTTCCTTCGTGCCTCACGTTTATCACTTGTACC
GTTCCACTGCTGCGTCCCTCCTGTAAACCTCTGTTACATGTTAACATTCG
ACTTGCTCCTTGGCCTGACATTATGATTTCCGTTGTAGCACAACCTGTTG
TTCCACCATCCTTCTTTTTTATTTTATACCCCTCCTGATACCCGCATTCC
TTATTTTCCTTAACGCTCCCCAATAG

CCCCAATGATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTACTTTAGCTTCCTAGGAACCA
TTCATGAACCTTGCTTACTTTCTTCTGGGAGCAATGAAAACAGTTAACAG
TTAAAATGCTAGGTGAAGAAAATTTATTTTGAGAGAAGATCTTATGAGTC
TAGGTGGGACTCAAATTTATAATCCTCTTGCTTCAGGGATTTACTGGAAA
AAGGTGTATTAGTTGGCAAAAAGTTGGTAAAATCTCTTCTTTTATAAATT
TTACCTCCTTAGGGGCTGACCCTCAGTAAGGAAGGTGCCCTCTGGTATGG
GTCAAGAGAGCTTGGATCCCAGAGTCCTTCACTTCCCAGGTCCTCTCTGG
TCCTGTGAGGGGTCCTTGACCTAGCCTGTGCTTTTTGGAAAATGTTAGCT
AGTAAATAAGTTTATTACTTATTTTAATGTGGAAAAGTATCTAGTGTGCT
TTGCCTTAAAGACTCCCCTGCATCAATTATGCAAGTCAGCGGTTCTCACA
GTATCCCTGTGGGTCACTGTGGACCCCCCTCTAATTCGCTCAAGAATTTG
TTTACGCTGTAAATCCCACTCCTTCATTGCCATTCAGTTTTTCTGTGAAC
CTTCTTCTTTAAATGGGGCCGGATTATAATCTTCCCGCGACGATTTACTC
GCCCATATTTGCTCATTTCCACCCCTGCCTATTTTCGGTTTCCCCCC

Query= MSMg01no533_c09.b1 MSMg01no533_c09.b1 CHROMAT_FILE:
MSMg01no533_c09.b1 PHD_FILE: MSMg01no533_c09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:17 2005
         (237 letters)



>mm_chr7_76133884_76134520
          Length = 637

 Score =  373 bits (193), Expect = e-108
 Identities = 223/233 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaaattactttgcattcaacaacttgaatatgaaagctatttctgaaagaaaga 64
           |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gaattccaaattactgggtattcaacaacttgaatatgaaagctatttctgaaagaaaga 332

                                                                       
Query: 65  gagaaacggagtgagacagacagtacataaaactatctttcaattatttttcaaagaaga 124
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 331 gagaaatggagtgagacagacagtacataaaaatatctttcaattatttttcaaagaaga 272

                                                                       
Query: 125 aaaatacgaaatattatttgttattgttttctaaataatttccccgaaattttaactttt 184
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 271 aaaatatgaaatattatttgttattgttttctgaataatttccccgaaattttaactttt 212

                                                                
Query: 185 gattttgaaattaatttcaaaaatttttaaactttattttaaaattatgcaaa 237
           |||||||||||| |||||||||||||||||||||||||  |||||||||||||
Sbjct: 211 gattttgaaattcatttcaaaaatttttaaactttattaaaaaattatgcaaa 159


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space:   143184
Effective search space used:   143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no533_c09.g1 MSMg01no533_c09.g1 CHROMAT_FILE:
MSMg01no533_c09.g1 PHD_FILE: MSMg01no533_c09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:17 2005
         (245 letters)



>mm_chr7_75986528_75987172
          Length = 645

 Score =  429 bits (222), Expect = e-125
 Identities = 237/242 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttactttagcttcctaggaaccattcatgaaccttgcttactttcttctgggagcaatg 60
           |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaatttagcttcctaggaatcattcatgaaccttgcttactttcttctgggagcaatg 260

                                                                       
Query: 61  aaaacagttaacagttaaaatgctaggtgaagaaaatttattttgagagaagatcttatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaacagttaacagttaaaatgctaggtgaagaaaatttattttgagagaagatcttatg 320

                                                                       
Query: 121 agtctaggtgggactcaaatttataatcctcttgcttcagggatttactggaaaaaggtg 180
           ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 agtctaggtgggattcaaatttataatcctcttgcttcagggatttactagaaaaaggtg 380

                                                                       
Query: 181 tattagttggcaaaaagttggtaaaatctcttcttttataaattttacctccttaggggc 240
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattagttggcaaaaaattggtaaaatctcttcttttataaattttacctccttaggggc 440

             
Query: 241 tg 242
           ||
Sbjct: 441 tg 442


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space:   150096
Effective search space used:   150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)