Query= MSMg01no533_m14.b1 MSMg01no533_m14.b1 CHROMAT_FILE:
MSMg01no533_m14.b1 PHD_FILE: MSMg01no533_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:05 2005
(590 letters)
>mm_chr7_17584891_17585880
Length = 990
Score = 1094 bits (566), Expect = 0.0
Identities = 584/590 (98%)
Strand = Plus / Plus
Query: 1 gagaggccaggcataactttggtactgttagatgttgaacatgtcctgggcacccagtcc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 gagaggccaggcataactttggtactgttagatgttgaacttgtcctgggcacccagtcc 260
Query: 61 agtcaagcagctcagccacctgattgggaacctgtcagattggatcgccacctggtggcc 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 agtcaagcagctcagccacctgattgggaacctgccagattggatcgccacctggtggcc 320
Query: 121 atagtcagaactgcagcccaggcttctgggttgtggctggtttgggattgagggctgcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagtcagaactgcagcccaggcttctgggttgtggctggtttgggattgagggctgcca 380
Query: 181 ttctagacagctttagaaaatggacacactgagggacatctcaggacgtcttgtgaccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctagacagctttagaaaatggacacactgagggacatctcaggacgtcttgtgaccag 440
Query: 241 cagtcatgaccaagttgggacgattcctgataaatgaatttgaagccacaatcccaaact 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtcatgaccaagttgggatgattcctgataaatgaatttgaagccacaatcccaaact 500
Query: 301 gtgaatttgggaactgggcgtagcaggtaccactcaaatcctctttcaggctgggacggt 360
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 501 gtgaatttgggaactgggcgtagcaggtaccattcaaatcctctttcaggccgggacggt 560
Query: 361 tatgccaggagccctggagtagggcactgtggagcttgaagtcctagcttcttcaagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgccaggagccctggagtagggcactgtggagcttgaagtcctagcttcttcaagctt 620
Query: 421 tgtcgtgtgggcaatggggtgaaactcccttccctcgtgctatctcctctcttccctatg 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtcgtgtgggcaatgggttgaaactcccttccctcgtgctatctcctctcttccctatg 680
Query: 481 gagcgaaatgaagaccggcaaggaagcaactcagaatctggactcccaccccctcacttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagcgaaatgaagaccggcaaggaagcaactcagaatctggactcccaccccctcacttc 740
Query: 541 ctattgcctgattttaaaaatcacattttagctaacataatggtacccag 590
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctattgcctgattttaaaaatcacattttagctaacataatggtacccag 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_m14.g1 MSMg01no533_m14.g1 CHROMAT_FILE:
MSMg01no533_m14.g1 PHD_FILE: MSMg01no533_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:05 2005
(550 letters)
>mm_chr7_17741219_17742168
Length = 950
Score = 862 bits (446), Expect = 0.0
Identities = 483/500 (96%), Gaps = 9/500 (1%)
Strand = Plus / Minus
Query: 51 aggaagagtgggggctccatggtctccgatgcatgcactgtcttcccatagcagaggaga 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 aggaagagtgggggctccatggtctccgatgcatgcactgtcttcccatagcagaggaga 891
Query: 111 gcttcagccccagcactgccaccatgctttgccatcccagggtcagctctgctgttctgc 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 gcttcagccccagcactgccaccatgctttgccatcccagggtcagctctgctgttctgc 831
Query: 171 atccctctgacctgagcctgcacctaggtagaagcccctcccagagccttatggacagaa 230
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 830 ctccctctgacctgagcctgcacctaggtagaagcccctcccagagccatatggacagaa 771
Query: 231 tccttactgctgtctccctctagatattgccaggtgtttctctaccccattctctcatta 290
||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 770 tccttactgctgtct-cctc--------cccaggtgtttctctaccccattctctcatta 720
Query: 291 tgtttcagtctccagaccacacagtgagcaacagactgataagcgcaccagtgctccaga 350
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 719 tgtttcagtctccagaccacacagtgagcaacagactgataagcgcacctgtgctccaga 660
Query: 351 atccaacagatcaccccagggctgatctctcctactcctgaccttggctctgtcaccagc 410
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 659 atccaacagatcacccccgggctgatctctcctactcctgaccttggatctgtcaccagc 600
Query: 411 agagaagatgactctgtgctccctatgcaacctctgtgacacagaaactccactgggccc 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 agagaagatgactctgtgctccctatgcaacctctgtgacacagaaactccactgggccc 540
Query: 471 cagacatccccatgtccacaacgctctgggaaggtggaatttaccctcagccagaggtat 530
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 539 cagacatccccatgtccacaacgctctgggaaggtggaatttaccctcagccagaggtgt 480
Query: 531 ctgtaagagctggaaaggga 550
||||||||||| ||||||||
Sbjct: 479 ctgtaagagctagaaaggga 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
