Query= MSMg01no533_n21.b1 MSMg01no533_n21.b1 CHROMAT_FILE:
MSMg01no533_n21.b1 PHD_FILE: MSMg01no533_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:11 2005
(603 letters)
>mm_chr7_99563173_99564173
Length = 1001
Score = 1131 bits (585), Expect = 0.0
Identities = 595/599 (99%), Gaps = 2/599 (0%)
Strand = Plus / Minus
Query: 5 gaattctcatgcaaatacaaaacggtgccaagaggagagaagcctgggtgtagacagaca 64
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 801 gaattctcatgcaaatacaaaacggtgc--agaggagagaagcctgggtgtagacagaca 744
Query: 65 cacacagatggagaatgcagaggcttctgggacccaaagagctgttgcatgcaaaccgca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cacacagatggagaatgcagaggcttctgggacccaaagagctgttgcatgcaaaccgca 684
Query: 125 tcacttaaatggtctcatgggtcaaagggaaatgaaaaggtgttgcctttgattaattct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tcacttaaatggtctcatgggtcaaagggaaatgaaaaggtgttgcctttgattaattct 624
Query: 185 ttcatgttttaaagcaaggaatgtaacgtgttaacatttcccaagtatgaaaatgttgtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttcatgttttaaagcaaggaatgtaacgtgttaacatttcccaagtatgaaaatgttgtg 564
Query: 245 tatcatgagttctctgatcagacataatcatactgaacagcacactttttaaaaggacag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tatcatgagttctctgatcagacataatcatactgaacagcacactttttaaaaggacag 504
Query: 305 aaaataagtggtactccagaagtaaaatcatcgtacagtattacaagcaaacacactttg 364
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 503 aaaatacgtggtactccagaagtaaaatcatcatacagtattacaagcaaacacactttg 444
Query: 365 attccttcctacataacatggaaggtactgaaccccttcatggtcacactttcttacatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 attccttcctacataacatggaaggtactgaaccccttcatggtcacactttcttacatg 384
Query: 425 tatggacatgaagtcaaatcaccattccagctcacacaggtttcaatgcacttaggggtt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tatggacatgaagtcaaatcaccattccagctcacacaggtttcaatgcacttaggggtt 324
Query: 485 taaacattttgacttatgacagattatatatggtttatgaggatattctttatttttcta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 taaacattttgacttatgacagattatatatggtttatgaggatattctttatttttcta 264
Query: 545 gacatatatagtacccgtgctttgtctccactgtacttgttccttttaatagagaagag 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gacatatatagtacccgtgctttgtctccactgtacttgttccttttaatagagaagag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1001
Length adjustment: 10
Effective length of query: 593
Effective length of database: 991
Effective search space: 587663
Effective search space used: 587663
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_n21.g1 MSMg01no533_n21.g1 CHROMAT_FILE:
MSMg01no533_n21.g1 PHD_FILE: MSMg01no533_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:11 2005
(576 letters)
>mm_chr7_99414822_99415797
Length = 976
Score = 1052 bits (544), Expect = 0.0
Identities = 570/580 (98%), Gaps = 4/580 (0%)
Strand = Plus / Plus
Query: 1 tgtcagcctgatgtatttaggaaatgtatttattatttgattcattcgctcattcatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tgtcagcctgatgtatttaggaaatgtatttattatttgattcattcgctcattcatttg 256
Query: 61 ttaattgttctgctttga---ttttttttttttaagatagaatgctgtgttgcccgagct 117
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 257 ttaattgttctgctttgatttttttttttttttaagatagaatgctgtgttgcctgagct 316
Query: 118 gctcttaaactcaccacgtagctaaggatgacattgggctcctgattcttctgccttcac 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gctcttaaactcaccacgtagctaaggatgacattgggctcctgattcttctgccttcac 376
Query: 178 tttccaaatattgagaggatagctgtgtgctaccatgcctgggacattctcaagtttaat 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tttccaaatattgagaggatagctgtgtgctaccatgcctgggacattctcaagtttaat 436
Query: 238 attcatcagacgaaaatacctcagcttttacctctgtgtgacttatttccttattcttgt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 attcatcagacgaaaatacctcagcttttacctctgtgtgacttatttccttattcttgt 496
Query: 298 atgcacatgtccattttttt-atcaacaataaaatatatttatttatttctccagacaac 356
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 497 atgcacatgtccatttttttaatcaacaataaaatatatttatttatttctccagacagc 556
Query: 357 ttcccaaagaaatcccacttctgatagaaatgaaaaatgtggtgaatagcatatagggtt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttcccaaagaaatcccacttctgatagaaatgaaaaatgtggtgaatagcatatagggtt 616
Query: 417 ttatgggaggagcatgtcatgaatgacaatgaacattcaacaatgctcaagggtgcaaaa 476
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 617 ttatgggaggagcatgtcatgaatgacaacgaacattcaacaattctcaagggtgcaaaa 676
Query: 477 gtatagtctgattagatttacagatatgaaatatttaatttaggaacaagaacaattcat 536
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 677 gtatagtctgattagatttacagatatgatatatttcatttaggaacaagaacaattcat 736
Query: 537 caaaagagatgcctaaaaggaggtgcatgttggctaagag 576
||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 caaaagagatgcctaaaaggaggtgcatgttggctaagag 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
