Query= MSMg01no534_a19.b1 MSMg01no534_a19.b1 CHROMAT_FILE:
MSMg01no534_a19.b1 PHD_FILE: MSMg01no534_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:25 2005
(641 letters)
>mm_chr7_127265145_127266185
Length = 1041
Score = 1094 bits (566), Expect = 0.0
Identities = 620/638 (97%), Gaps = 2/638 (0%)
Strand = Plus / Minus
Query: 5 gaattcttggtctctaacggctggatctccctttagggtcaagtgcttccggatagcata 64
|||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||
Sbjct: 705 gaattcttggtctctaacggatagatctccctttagggtcaagtgcttccggaaagcata 646
Query: 65 ggatgcagaaacgttgagggctttacatcatgctagggccaatggcgtcagttgtttctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ggatgcagaaacgttgagggctttacatcatgctagggccaatggcgtcagttgtttctc 586
Query: 125 ctcagcaaacttccttttcttctgatattcctttgagaagctcctttttgtcacttggac 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 cccagcaaacttccttttcttctgatattcctttgagaagctcctttttgtcacttggac 526
Query: 185 ccacccaactgtgggaccaaagcagctgatctggcccctctccccactcctggctcttac 244
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 525 ccacccaactgtgggaccaaagcagctgatctgtcccctctccccactcctggctcttac 466
Query: 245 atatccatagggcacatgagcagatataatactggctaccgcgattgggt-caaggttgg 303
||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 465 atatccatagggcacatgagcagatggaatactggctaccgcgatt-ggtccaaggttgg 407
Query: 304 tcacatggccctgatctgtccaatcatagccaagcctagaatttgcatgtactacaggta 363
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 406 tcacatggccctgatctgtccaatcagagccaagcctagaatttgcatgtactacaggta 347
Query: 364 tagaaagtacttagtactttctaatcaagtactgagtacaacgaaaagctacagagacct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tagaaagtacttagtactttctaatcaagtactgagtacaacgaaaagctacagagacct 287
Query: 424 ctgtgtgggataatccttctgaaaaagcagctcacagtaaggaaagtggggtaaaatcgc 483
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctgtgtgggacaatccttctgaaaaagcagctcacagtaaggaaagtggggtaaaatcgc 227
Query: 484 atgagctccagatcctcacaatgcacgaagatcttgcagacagcctggactacatacaag 543
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 226 atgagctccagatcctcacaatgcacaaagatcttgcagacagcctggactacatacaag 167
Query: 544 gccctgtctcaagacaataaaacaaagatcaccccactgttgattcaatgaatcaatgac 603
|||||||||||||||||||||||||||||| |||||||||||| |||| ||| | |||||
Sbjct: 166 gccctgtctcaagacaataaaacaaagatctccccactgttgactcaacgaaccgatgac 107
Query: 604 ctctccacgtcacatcaatctttttataaacagctttg 641
|||||||||||||| |||||||||||||||||||||||
Sbjct: 106 ctctccacgtcacaccaatctttttataaacagctttg 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no534_a19.g1 MSMg01no534_a19.g1 CHROMAT_FILE:
MSMg01no534_a19.g1 PHD_FILE: MSMg01no534_a19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:25 2005
(529 letters)
>mm_chr7_127080384_127081312
Length = 929
Score = 1007 bits (521), Expect = 0.0
Identities = 527/529 (99%)
Strand = Plus / Plus
Query: 1 ataagggatgttccaacctgaaagaggcagagaagaattacaggcttcagacccgtgagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataagggatgttccaacctgaaagaggcagagaagaattacaggcttcagacccgtgagc 260
Query: 61 tcttaatttccactcagactgagcatgtaaggtaagcatcattatggatcaagggcctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttaatttccactcagactgagcatgtaaggtaagcatcattatggatcaagggcctct 320
Query: 121 ttcagccctgcgagtatccagcacccagccaactatttgccttgatttattgccaaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcagccctgcgagtatccagcacccagccaactatttgccttgatttattgccaaaatg 380
Query: 181 gcagccgttctgcctgagaaaacacccgacctaaaatggtttccttatggctccccccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagccgttctgcctgagaaaacacccgacctaaaatggtttccttatggctccccccat 440
Query: 241 ttgttaaggaagatgttaacatcctgggatctgtgagacaggatttattcagcctgcctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgttaaggaagatgttaacatcctgggatctgtgagacaggatttattcagcctgcctg 500
Query: 301 gaagactgtggtaaagcacagggctccaaaaataacctgtaaaacacaaccgagagcagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagactgtggtaaagcacagggctccaaaaataacctgtaaaacacaaccgagagcagt 560
Query: 361 ggctaaggctggggggcagagtgaagcaggcttgggaaacgccttcctgtatccatgcaa 420
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 ggttaaggctggggggcagagtgaagcaggcttgggaaacgtcttcctgtatccatgcaa 620
Query: 421 gaactgtcaactgtgtggccagccttacagaaactgcaacagaacttccagggttaatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaactgtcaactgtgtggccagccttacagaaactgcaacagaacttccagggttaatga 680
Query: 481 tttcatagaggattttttttcaggctatttgtgtttcatgtttatgaga 529
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttcatagaggattttttttcaggctatttgtgtttcatgtttatgaga 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
