Query= MSMg01no537_b12.b1 MSMg01no537_b12.b1 CHROMAT_FILE:
MSMg01no537_b12.b1 PHD_FILE: MSMg01no537_b12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:23 2005
(648 letters)
>mm_chr7_143379210_143380258
Length = 1049
Score = 1164 bits (602), Expect = 0.0
Identities = 635/646 (98%), Gaps = 1/646 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcttacagatgaggagacagatccattgaagacttaggacagcagagcagtca 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 ggaattctcttacagaggaggagacagatccattgaagacttaggacagcagagcagtca 790
Query: 64 actctgtcacagcagggtcttcccatcaggacaatgccgacttacctgaagaatgaatgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 actctgtcacagcagggtcttcccatcaggacaatgccgacttacctgaagaatgaatgc 730
Query: 124 cttcttgctctacattaaaaggagcttatcctgggggcttacccaccactgcatctgcca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 cttcttgctctacattaaaaggagcttatcctgggggcttacccaccactgcatctgcca 670
Query: 184 cgggtctttgcttaaagacttacagcaaagcacttacagttcccacccgtggcatttgca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cgggtctttgcttaaagacttacagcaaagcacttacagttcccacccgtggcatttgca 610
Query: 244 gctcagtgtaatttattgaatatcgtccaaagagcaaacacagggtttatctggtggcgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gctcagtgtaatttattgaatatcgtccaaagagcaaacacagggtttatctggtggcgt 550
Query: 304 tttagttgggtggtaaatgtttgccgtgtaccaagaatagaaaaaaagggtaagattgtg 363
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 549 tttagttgggtggtaaatgtttgccgtgtaccaagaatagaaagaaagggtaagattgtg 490
Query: 364 acatgaagagggtggaggagagggagcggggcagagatgtaaagacacagaaagaggggc 423
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acatgaagagggtgaaggagagggagcggggcagagatgtaaagacacagaaagaggggc 430
Query: 424 aggagagagctgagttcccagagcttgggagataccaggcagatgcttcatgttcacacc 483
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 429 aggagagagctgagttcccagagcttgggagataccaggcagttgcttcatgttcacacc 370
Query: 484 tgcatct-cctccagtccaggctcagccccctcggcttaggtaaatgcatgcttgctggc 542
|||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 369 agcatctgcctcccgtccaggctcagccccctctgcttaggtaaatgcatgcttgctggg 310
Query: 543 ttgcctctgaagcctgatccttcctctcttgttgggttcccccaaagaagtaactcagag 602
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttgcctccgaagcctgatccttcctctcttgttgggttcccccaaagaagtaactcagag 250
Query: 603 aaagacctcaggaagtgtctgctcctaggattcatagatagaccag 648
||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aaagaccccaggaagtgtctgctcctaggattcatagatagaccag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1049
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1039
Effective search space: 662882
Effective search space used: 662882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_b12.g1 MSMg01no537_b12.g1 CHROMAT_FILE:
MSMg01no537_b12.g1 PHD_FILE: MSMg01no537_b12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:23 2005
(610 letters)
>mm_chr7_143218447_143219456
Length = 1010
Score = 1133 bits (586), Expect = 0.0
Identities = 604/610 (99%)
Strand = Plus / Plus
Query: 1 agggtcctcccagctctcctcccagtatctgatgttagttttgcttggcttcatcatcct 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 agggtcctcccagctctcctcccagtatctgatgttaattttgcttggcttcatcatcct 260
Query: 61 tcatgtctgcctccatctctaaatagccttgccccggtacgtatctcccttttagctgtg 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatatctgcctccatctctaaatagccttgccccggtacgtatctcccttttagctgtg 320
Query: 121 aggacaccagtcagattagattagggcccacctacttatcattccagggtggcctcattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggacaccagtcagattagattagggcccacctacttatcattccagggtggcctcattt 380
Query: 181 aactttgtgtcatctgcaaagactcctttttcagagaaggtgatatctacattctaggtg 240
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 381 aactttgtgtcatctgcaaagactcctttttcagagaaggcgatatctacattccaggtg 440
Query: 241 gctacagattggcacacaccataaaacccaggacaagacctgaaaatcagctttaaaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctacagattggcacacaccataaaacccaggacaagacctgaaaatcagctttaaaaag 500
Query: 301 agagacatcctgggaagccatttgaaaccagagacctcacaggttgccaggttggcatga 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaggcatcctgggaagccatttgaaaccagagacctcacaggttgccaggttggcatga 560
Query: 361 aaagtaagagcagagaagtgcctggcttaggaccatcagcttttcagaggacagaggtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaagtaagagcagagaagtgcctggcttaggaccatcagcttttcagaggacagaggtct 620
Query: 421 ccagggagctgcacccacactaccttctttcttgttcctggagggagtcgggataatcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccagggagctgcacccacactaccttctttcttgttcctggagggagtcgggataatcat 680
Query: 481 agagctggctctggtctttctctggtcccagcagcccatgctctttcaggatgtctatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agagctggctctggtctttctctggtcccagcagcccatgctctttcaggatgtctatct 740
Query: 541 tggaggatcaaagtctatagtatctcccaagcttctgaagacttgtagtgtggacctgtt 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggaggatcaaaggctatagtatctcccaagcttctgaagacttgtagtgtggacctgtt 800
Query: 601 ctggagccat 610
||||||||||
Sbjct: 801 ctggagccat 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
