Query= MSMg01no537_g20.b1 MSMg01no537_g20.b1 CHROMAT_FILE:
MSMg01no537_g20.b1 PHD_FILE: MSMg01no537_g20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:47 2005
(684 letters)
>mm_chr7_110893451_110894534
Length = 1084
Score = 1158 bits (599), Expect = 0.0
Identities = 659/679 (97%)
Strand = Plus / Plus
Query: 6 aattccacaaagctcacaggttattaatgaatatcagtccccaaaactggacttatattt 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 206 aattccacaaagcttgtaggttattaatgaatatcagtccccaaaactggacttaaattt 265
Query: 66 ttgggccacttcccccagacagagaggtttgattcttcttgggttttggctgcttgtttc 125
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 266 ttgggccacttctcccagacagagaggtttgattcttcttggcttttggctgcttctttc 325
Query: 126 agttctatacattcaaggtctggggagatgctcaatacctaaaagcaatggctgaaaacg 185
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 326 agttctatacattcaaggtctggggagatgctcaatacctaagagcaatggctgaaaacg 385
Query: 186 gacctgggttcagttctcagcacccacatggagactcacagccatctctaactccaggta 245
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 386 gacctgggttcagttctcagcacccacatggagactcacagtcatctgtaactccaggta 445
Query: 246 cagagatatgacactctttcaggcttctttaggcctctggcatgcatgcagcatgcctat 305
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 446 cagagatatgacactctttcaggcttctttaggcctctgacatgcatgcagcatgtctat 505
Query: 306 atgcctgcaggtaaaaccatcatacacagaataaaagcatgattttattaaaagtagata 365
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 506 atgcctgcaggtaaaaccatcatacacagaataaaagtatgattttattaaaagtagata 565
Query: 366 catttaaaatatgctaaatgaagatacaaatgtcattttaaattagtaaactataatctg 425
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 catttaaaacatgctaaatgaagatacaaatgtcattttaaattagtaaactataatctg 625
Query: 426 gtttttgcaccctttttcatgtatttttcttgtaactcactgatttttgttccctatgtt 485
||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||
Sbjct: 626 gtttttgcaccctttttcatgaatttttcatgtaactcactaatttttgttccctatgtt 685
Query: 486 atactattgaggattttttaagggggatatgggtagggaggaacatacataaagtctact 545
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 686 atactattgaggattttttaaggaggatatgggtagggaggaacatacataaagtctact 745
Query: 546 cattttaattcctatgtgatcacaccttggccattgtaaattagaaagggtaactgactc 605
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 cattataattcctatgtgatcacaccttggccattgtaaattagaaagggtaactgactc 805
Query: 606 attcaactttatatctctaatactggttggtacagaaagtattattttggagaaagtaaa 665
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 806 attcaactttatatctctaatactggttggtacagaaagtattattttggaaaaagtaaa 865
Query: 666 taataaaattctattcact 684
|||||||||||||||||||
Sbjct: 866 taataaaattctattcact 884
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space: 723876
Effective search space used: 723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_g20.g1 MSMg01no537_g20.g1 CHROMAT_FILE:
MSMg01no537_g20.g1 PHD_FILE: MSMg01no537_g20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:48 2005
(634 letters)
>mm_chr7_111067321_111068354
Length = 1034
Score = 1094 bits (566), Expect = 0.0
Identities = 617/634 (97%), Gaps = 2/634 (0%)
Strand = Plus / Minus
Query: 2 gttcaagtgtgtactacaggaggtgtccaataagtgtcaatagtgctgataagaaaccaa 61
||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 1034 gttcaagcatgtactacaggaggtgtccaacaagtgtcaatagtgctgataaggaaccaa 975
Query: 62 ggtaacatgagctgagaaaggaccaaagtttaatcaacatggaaaccattgatgatcaag 121
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 974 gataacatgagctgagaaaggaccaaagtttaatcaacatggaaaccattggtgatcaag 915
Query: 122 aaaggagaagttccagcagagtggttgaaataaaatcgtattctaaggcatcaaggagaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 aaaggagaagttccagcagagtggttgaaataaaatcgtattctaaggcatcaaggagaa 855
Query: 182 agagggagagtgagagacaggtgcatcagagcaatggggcaggattccatgacgcagatg 241
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 854 agagggagagtgagagacaggtgcatcagagcaatggggtaggattccatgatgcagatg 795
Query: 242 gtcttttttcaggctcacatgtcaaagtgtaatcagtaagtgttcatgtgtatttcccat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gtcttttttcaggctcacatgtcaaagtgtaatcagtaagtgttcatgtgtatttcccat 735
Query: 302 cactacatttagctacttacatgaaataaattaaagaggattaaataatctagattgaat 361
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 734 cactacatttagctacttacgtgagataaattaaagaggattaaataatctagattgaat 675
Query: 362 tttggctaagtcagcataatctgaatacagagtatataag-ctaataaatgattaataat 420
|||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||
Sbjct: 674 tttggctaagtcagcataatctgaattcagagtatat-agactaataaatgattaataat 616
Query: 421 aatgatgtactggtagagaatatctaaggttaaaaatccagtcaaaatatgagaggagga 480
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 615 aatgatgtactggtagagaatatctaaggttaaaaatccagttaaaatttgagaggagga 556
Query: 481 ggaataatgactagaaaacagactttctagatcatgggttaggcttaatcattgatttta 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gggataatgactagaaaacagactttctagatcatgggttaggcttaatcattgatttta 496
Query: 541 ggtacattatacaattcttgatgagatcttgagggcataaatgcaacagttaagttacta 600
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 495 ggtacattatacaattcttgatgagatcttgagggcatagatgcaacagttaagttacta 436
Query: 601 agaattatatcatgatgattatgagagtgagaca 634
||||||||||||||||||||||||||||||||||
Sbjct: 435 agaattatatcatgatgattatgagagtgagaca 402
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
