Query= MSMg01no537_p03.b1 MSMg01no537_p03.b1 CHROMAT_FILE:
MSMg01no537_p03.b1 PHD_FILE: MSMg01no537_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:28 2005
(532 letters)
>mm_chr7_19773605_19774537
Length = 933
Score = 909 bits (470), Expect = 0.0
Identities = 513/528 (97%), Gaps = 3/528 (0%)
Strand = Plus / Plus
Query: 7 attccagtttgtttcccagcacccacgtggtggttcacggatgtccaaaactccagttcc 66
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attccagtttgagtcccagcacccacgtggtggttcacggatgtccaaaactccagttcc 266
Query: 67 aggggacccgatgctgtcttttagcttccatggactctgcatacatatagtgtacagaca 126
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 267 aggggacccgatgctgtcttttcgcttccatggactctgcatacatatagtgtacagaca 326
Query: 127 cacttgcaggcaaaacacccatacacatcaaataataaaataaacttaggagagtaaaaa 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 327 cacttgcaggcaaaacacccatacacatcaaataataaaataaacttaggagagt-aaaa 385
Query: 187 aaaaaatctccagctgtgtagacagtaattctcttagggttgggtcattgtaaaa--ctt 244
||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||
Sbjct: 386 aaaaaatctccagctgtgtaggcagtaattttcttagggttgggtcattgtaaaactctt 445
Query: 245 taagagaaggagcatggcagtgtacaccagatttcctgtgtgctgatgaggctgaagaca 304
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 446 taggagaaggagcatggcagtgtacaccagatttcctgggtgctgatgaggctgaagaca 505
Query: 305 aaataagttcaaggccagcctgggcagtttaactaagaaattttaacatttatttattca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aaataagttcaaggccagcctgggcagtttaactaagaaattttaacatttatttattca 565
Query: 365 ctttgtgtttgtgcacatacatgtgcaccgtatgtgtggtccaaagacaagtcacagaag 424
|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 566 ctttgtgtttgtgcacgtacatgtgcaccgtatgtgtggtccgaagacaagtcacaggag 625
Query: 425 tcaattttctctttcctccatatgaattctggggactgaactcaaatcatcaggtttggc 484
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tcaattttctctttcccccatatgaattctggggactgaactcaaatcatcaggtttggc 685
Query: 485 accaaacacacttattgggccatctcacgggctcatatcctgggcaat 532
|||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 686 accaaacacacttattgggccatctctcgggctcatatcctgggcaat 733
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 933
Length adjustment: 10
Effective length of query: 522
Effective length of database: 923
Effective search space: 481806
Effective search space used: 481806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_p03.g1 MSMg01no537_p03.g1 CHROMAT_FILE:
MSMg01no537_p03.g1 PHD_FILE: MSMg01no537_p03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:28 2005
(588 letters)
>mm_chr7_19909875_19910862
Length = 988
Score = 563 bits (291), Expect = e-164
Identities = 306/317 (96%), Gaps = 10/317 (3%)
Strand = Plus / Minus
Query: 272 ctgatgatctgaggtccatccccaggatcaacaaggtgaaaagagagaactgactcctgc 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 ctgatgatctgaggtccatccccaggatcaacaaggtgaaaagagagaactgactcctgc 929
Query: 332 aagttatccactgatcttcacactggaggagtggcacatacccatttgcgtgggcgggcg 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 aagttatccactgatcttcacactggaggagtggcacatacccatttgcgtgggcgggcg 869
Query: 392 gcaggtgagggggcgcgcgcgcacacacacacacacacacacacacacccgtaaaaaaat 451
||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 868 gcaggtgagggggcgcg----------cacgcacacacacacacacacccgtaaaaaaat 819
Query: 452 atattttaaaatcaaaagtatttttttaaaggaagacctaaaaaagaaggcaatgtttca 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 atattttaaaatcaaaagtatttttttaaaggaagacctaaaaaagaaggcaatgtttca 759
Query: 512 gtaactagtcaggaggggaggctgtaaacatctgaactgagcattcccaaatcagaggaa 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 gtaactagtcaggaggggaggctgtaaacatctgaactgagcattcccaaatcagaggaa 699
Query: 572 actagaaacatagaggt 588
|||||||||||||||||
Sbjct: 698 actagaaacatagaggt 682
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
