Query= MSMg01no538_f19.b1 MSMg01no538_f19.b1 CHROMAT_FILE:
MSMg01no538_f19.b1 PHD_FILE: MSMg01no538_f19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:59 2005
(354 letters)
>mm_chr7_119363089_119363842
Length = 754
Score = 661 bits (342), Expect = 0.0
Identities = 348/350 (99%)
Strand = Plus / Minus
Query: 5 gaattctgtaatggataaatatctttaacctgcagtaagttcctgcctgcctgctttcct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gaattctgtaatggataaatatctttaacctgcagtaagttcctgcctgcctgctttcct 495
Query: 65 cttaatctttcttccgaggcagcttagatagcaagggactccctaggacagcccacaccc 124
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 494 cttaatctttcttccgaggcagcttagataccaagggactccctaggacagcccacaccc 435
Query: 125 tgggggctcaggagggactgcccactctgtatcagatcagtgtggcctgcaggaggcgtc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tgggggctcaggagggactgcccactctgtatcagatcagtgtggcctgcaggaggcgtt 375
Query: 185 cattccaagcaattccttgcagagctgggttttcatctagaaaagtccacgcctctgcct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cattccaagcaattccttgcagagctgggttttcatctagaaaagtccacgcctctgcct 315
Query: 245 aggacagcacgacagcaaaatgcttgctgcgcatgctcagggcccaggatttcctcaccg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aggacagcacgacagcaaaatgcttgctgcgcatgctcagggcccaggatttcctcaccg 255
Query: 305 tggggcaagggagagtgacagataaagggagcaggaaatttagttgcttg 354
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tggggcaagggagagtgacagataaagggagcaggaaatttagttgcttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no538_f19.g1 MSMg01no538_f19.g1 CHROMAT_FILE:
MSMg01no538_f19.g1 PHD_FILE: MSMg01no538_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:00 2005
(419 letters)
>mm_chr7_119201607_119202422
Length = 816
Score = 752 bits (389), Expect = 0.0
Identities = 411/419 (98%), Gaps = 3/419 (0%)
Strand = Plus / Plus
Query: 1 attgaaattaagataatggtttttagaagtgttgttatttttgtgcaaataaaacatgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgaaattaagataatggtttttagaagtgttgttatttttgtgcaaataaaacatgcc 260
Query: 61 atttgtcacattataaaattaaaaggcattgacagtactccatgtagtaaccacttttag 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttgttacattataaaattaaaaggcattgacagtactccatgtagtaaccacttttag 320
Query: 121 ttattttgcttatttttatcttacctcatgaaataatgcttttaagaaaatggataatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttattttgcttatttttatcttacctcatgaaataatgcttttaagaaaatggataatgc 380
Query: 181 ttacaaatattcataagcatggggatctgagttcgctccctgtgttagtactgcagatca 240
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 381 ttacaaatattcataagcatggggatctgagttggctccctgtgttagtgctgcagatca 440
Query: 241 aatcaaatttgattcacagggttggtgacagggtcggggagaggcaattaggcagttggg 300
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 aat-aaatttgattcacagggttggtgacggggtcggggagaggcaattaggcagttggg 499
Query: 301 ctagttggatcttcctgtgttatatatgatgtttaaagtgaaaatgcttatgtatttcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 500 ctagttggatcttcctgtgttatatatgatgtttaaagtgaaaatgcttatatatttcca 559
Query: 361 tcttaattattggtgtttagacttagagaataagattatttacactctaatataaccta 419
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 560 tcttaattattggtgtttagacttagagaataagattatttacact--aatataaccta 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 816
Length adjustment: 9
Effective length of query: 410
Effective length of database: 807
Effective search space: 330870
Effective search space used: 330870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
