Query= MSMg01no538_h14.b1 MSMg01no538_h14.b1 CHROMAT_FILE:
MSMg01no538_h14.b1 PHD_FILE: MSMg01no538_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:08 2005
(523 letters)
>mm_chr7_122392443_122393366
Length = 924
Score = 959 bits (496), Expect = 0.0
Identities = 514/520 (98%), Gaps = 1/520 (0%)
Strand = Plus / Plus
Query: 5 gaattcttaatgtcacagacaggtagcgtagagagggttccaaagagatttttttaaata 64
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttagtgtcacagacaggtagcatagagagggttccaaagagatttttttaaata 264
Query: 65 aacaaggttttggagtcaaggggctgccatttggcatttagttcataagtagttcacagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacaaggttttggagtcaaggggctgccatttggcatttagttcataagtagttcacagt 324
Query: 125 atgtggttatagccaggttgcctgtgatttctgggtagcggggg-agggggaaatttggt 183
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 acgtggttatagccaggttgcctgtgatttctgggtagcgggggaagggggaaatttggt 384
Query: 184 taatgtgtctagcatatgggatgtgtcacttatacccactctcccaccccattgctgctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taatgtgtctagcatatgggatgtgtcacttatacccactctcccaccccattgctgctt 444
Query: 244 ggtggattcctttctggatgtgtgtacactaagcacacattctgcagcagcttctgccat 303
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 ggtggattcctttctggatgtgtgtacactaagcacatattctgcagcagcttctgccat 504
Query: 304 cttttagcgttttccaccttcagcattctccttgaagcaaacattcgtgattcaacaata 363
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 505 cttttagcgttttccaccttcagcattctccttgaagcaaagattcgtgattcaacaata 564
Query: 364 gttcctaagtgcagaaattgcctgtaatccacatctaatgtcagccattctccaaactct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gttcctaagtgcagaaattgcctgtaatccacatctaatgtcagccattctccaaactct 624
Query: 424 ctgtagaaaaatccaactgtgatgtccaaaactatatcaaacaggatttatgtcagctct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctgtagaaaaatccaactgtgatgtccaaaactatatcaaacaggatttatgtcagctct 684
Query: 484 tggaaggggcttctgccaacagcagctataaaactctcag 523
||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tggaaggggcttctgccaacagcagctataaaactctcag 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 924
Length adjustment: 10
Effective length of query: 513
Effective length of database: 914
Effective search space: 468882
Effective search space used: 468882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no538_h14.g1 MSMg01no538_h14.g1 CHROMAT_FILE:
MSMg01no538_h14.g1 PHD_FILE: MSMg01no538_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:08 2005
(469 letters)
>mm_chr7_122528457_122529325
Length = 869
Score = 884 bits (457), Expect = 0.0
Identities = 466/469 (99%)
Strand = Plus / Minus
Query: 1 tttgttgtttgaatatagcattgcacagttgcagacatacaactctctgagcgtcaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tttgttgtttgaatatagcattgcacagttgcagacatacaactctctgagcgtcaggaa 610
Query: 61 tctctgccacatgagaagaaatttccctgcacagtcatttgtagactaaattaaaatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tctctgccacatgagaagaaatttccctgcacagtcatttgtagactaaattaaaatata 550
Query: 121 aactggtcctcagtgagtatacaaagaatgttctaataaatttcaataagaataaccctc 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 549 aactggtcctcagtgagtatacaaagaatgctctaataaatttcaataagaataaccctc 490
Query: 181 ctttaattcagagctcaaacatctttgttgccccttgaaacagttagtttattactatgt 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 489 ctttaattcagagctcaaacatctttgctgccccttgaaacagttagtttattactatgt 430
Query: 241 cctacatgcccagctcagtgcttcatactcagtaaaaggatgctagatcattgtcctgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cctacatgcccagctcagtgcttcatactcagtaaaaggatgctagatcattgtcctgct 370
Query: 301 gaatgaaaacacaaacaaattatagttatgtcaaatgttactatgttgaaataaggggcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gaatgaaaacacaaacaaattatagttatgtcaaatgttactatgttgaaataaggggcc 310
Query: 361 attttccaatgagagcaactttggagacatagactcactagatctgttcattatggtcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 attttccaatgagagcaactttggagacatagactcactagatctgttcattatggtcct 250
Query: 421 ccctgttgggaacatagcatggaggtcctcgcatccacagacctccaga 469
|||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 249 ccctgttgggaatatagcatggaggtcctcgcatccacagacctccaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
