Query= MSMg01no539_g09.b1 MSMg01no539_g09.b1 CHROMAT_FILE:
MSMg01no539_g09.b1 PHD_FILE: MSMg01no539_g09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:20 2005
(359 letters)
>mm_chr7_109356658_109357416
Length = 759
Score = 694 bits (359), Expect = 0.0
Identities = 359/359 (100%)
Strand = Plus / Minus
Query: 1 aaatgaaaaaaatgaggcttaacgtgttagaggtactgggaaatacattgataaaattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aaatgaaaaaaatgaggcttaacgtgttagaggtactgggaaatacattgataaaattaa 500
Query: 61 atctgctacttaagatttgatggaattgtcattttgatctgaatatatcaatcagcttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atctgctacttaagatttgatggaattgtcattttgatctgaatatatcaatcagcttgt 440
Query: 121 agttttgatgtttatataaaccataagacctaaaaacaaataatgcaaaagcacagaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agttttgatgtttatataaaccataagacctaaaaacaaataatgcaaaagcacagaaga 380
Query: 181 gaactgaagtcttaaaagttgtaacttggtgttttctgtatcattttctcagtttgagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaactgaagtcttaaaagttgtaacttggtgttttctgtatcattttctcagtttgagca 320
Query: 241 tcaccacctgactcactcttccttgtaagtttccatagcacttaacctgatcttctgctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcaccacctgactcactcttccttgtaagtttccatagcacttaacctgatcttctgctt 260
Query: 301 gtagcagacattttacattttagctatttgacattttactagattatgttttgttttgt 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtagcagacattttacattttagctatttgacattttactagattatgttttgttttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_g09.g1 MSMg01no539_g09.g1 CHROMAT_FILE:
MSMg01no539_g09.g1 PHD_FILE: MSMg01no539_g09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:20 2005
(240 letters)
>mm_chr7_109196498_109197136
Length = 639
Score = 456 bits (236), Expect = e-133
Identities = 239/240 (99%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 1 ctagatgctatgctttctgtaactacggagtaaataagcctgggcctgctatctcctcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagatgctatgctttctgtaactacggagtaaataagcctgggcctgctatctcctcac 260
Query: 61 agctagagattaagtgttctccctcagcctccaaggtttctatgctgctgcttctaagat 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 agctagagattaagtgttctccctcagcctccaaggtttctatg-tgctgcttctaagat 319
Query: 121 tcttttctctactgagctatctgaacactcggagtaagttttagattcacactaaatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcttttctctactgagctatctgaacactcggagtaagttttagattcacactaaatttc 379
Query: 181 acattgcctaaaagcttcccccaagatcatattgggcaaaaatgagtattctgtgtttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acattgcctaaaagcttcccccaagatcatattgggcaaaaatgagtattctgtgtttaa 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 639
Length adjustment: 9
Effective length of query: 231
Effective length of database: 630
Effective search space: 145530
Effective search space used: 145530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
