Query= MSMg01no540_h12.b1 MSMg01no540_h12.b1 CHROMAT_FILE:
MSMg01no540_h12.b1 PHD_FILE: MSMg01no540_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:45 2005
(628 letters)
>mm_chr7_128507963_128508990
Length = 1028
Score = 1102 bits (570), Expect = 0.0
Identities = 614/630 (97%), Gaps = 4/630 (0%)
Strand = Plus / Minus
Query: 1 aaacaacaacaaacaaacaaataaacaaaaaccaacagaatgttggggtagggagacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 791 aaacaacaacaaacaaacaaataaacaaaaaccaacagaatgttggggtagggaggcagc 732
Query: 61 tcagtggagaaagtgctgtgcaagt--aagtatgaacacttgagttcaaatacccagaat 118
|||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||
Sbjct: 731 tcagtggagaaagtgctgtgca--tacaagtatgaagacttgagttcaaatacccagaat 674
Query: 119 ccatgtaaagtgagatacagacgtttgtatctgtaatcctagtactactacagggagatg 178
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 673 ccatgtaaagtgagatacagacgtttgtatctgtaatcctagtactgctacagggagatg 614
Query: 179 gaaggagacaggagacttcctggaagctcataggtcaactagctcgatgtcaaaagattc 238
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 613 gaaggagacaggagacttcctggaagctcataggtcaactagctcgacgtcaaaagattc 554
Query: 239 tatcgcaaagtggaaggccaaggccaatacctggtgtcatcttctgacttccacatgtac 298
| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tttcgcaaagtggaaggccagggccaatacctggtgtcatcttctgacttccacatgtac 494
Query: 299 actgtggcatgtgtgcactcacactcagatgtgaatgtccacacatacgtatgcacacac 358
|||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 493 actgtggcatgtgtgcacccacactcagatgtgaatgtccacacatatgtatgcacacat 434
Query: 359 ggagtaagggagtaaagaaaaggaagatggtgcttaccagggtccggggaatgactgaat 418
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 433 ggagtaagggagtaaagaaaaggaagatggtgcttaccagggtctggggaatgactgaat 374
Query: 419 ggagcttcagtttgggagatgagaatgtcctggagatagacagtgatgatgtttgtacag 478
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 373 ggagcttcagtttgggagatgagaatgtcccggagatagacagtgatgatgtttgtacag 314
Query: 479 tagcatgcctgtcttcctgccactgaaaccaacacttaaaaccagccaggataggaaatg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tagcatgcctgtcttcctgccactgaaaccaacacttaaaaccagccaggataggaaatg 254
Query: 539 taatgttttgattattctgcctcaataaaaaaggaggttcattatgcggcaaaacaattg 598
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 253 taatgttttgattattctgcctcaataaaaaaggaggttcattatgtggcaaaacaattg 194
Query: 599 aattatgcaagttcttcatcacgctcctga 628
||||||||||||||||||||||||||||||
Sbjct: 193 aattatgcaagttcttcatcacgctcctga 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no540_h12.g1 MSMg01no540_h12.g1 CHROMAT_FILE:
MSMg01no540_h12.g1 PHD_FILE: MSMg01no540_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:45 2005
(634 letters)
>mm_chr7_128335064_128336097
Length = 1034
Score = 1104 bits (571), Expect = 0.0
Identities = 621/641 (96%), Gaps = 8/641 (1%)
Strand = Plus / Plus
Query: 1 tatatctctgtgtgtatatgtgttgtgtgtttgtgtctatgtgtctgtgtgtgtgtgtgt 60
||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||
Sbjct: 195 tatatctctgtgtgtatatgtgttgtgtgtttgtgcctgtgtgtgtgtgtgtgtgtgtgt 254
Query: 61 gtgtg------tgtatgtatgtatgtctctgcatatgtgtgcaggttcctgtggaggcaa 114
||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gtgtgtatgtatgtatgtatgtatgtctctgcatatgtgtgcaggttcctgtggaggcaa 314
Query: 115 gaagagggcgccctggagttggaattctaggcaggtgtgagcaggaagatgatgaaacaa 174
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gaagagggtgccctggagttggaattctaggcaggtgtgagcaggaagatgatgaaacaa 374
Query: 175 agagctccaaaactagatacgaaattgcagattgttttgctaggtctcatgaaggaagag 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agagctccaaaactagatacgaaattgcagattgttttgctaggtctcatgaaggaagag 434
Query: 235 aatttttattagagaggagggaggtcctggaaagagtaaatcttgaactggactatataa 294
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aatttttattagagagaaaggaggtcctggaaagagtaaatcttgaactggactatataa 494
Query: 295 tagttttctggctaagggcaaggaagaatggttttggtgcactgtggcaaaatgccacag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tagttttctggctaagggcaaggaagaatggttttggtgcactgtggcaaaatgccacag 554
Query: 355 ataggctggcttataaaatgtaaaactttacttcccacaactgtagaagttgggggatcc 414
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 555 ataggctggcttataaaatgtaaaactttacttcccacaactgtagaagttgggagatcc 614
Query: 415 aagatcaaggaactgtgaagtcagctgggacccaacaaatgctactctctgcctgcctgc 474
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aagatcaaggaactgtgaagtcagctgggacccaacaaatgctactctctgcctgcctgt 674
Query: 475 ctgtctgtctttgtctgtctctcctctctttctctgtgtctctctctgtctatatgtctc 534
||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 675 ctgtctgtctttgtctgtctctcttctctttctctgtgtctctgtctgtctgtatgtctc 734
Query: 535 tctgattctccactgggctagcttgggcagtgttttctatgtagtgacagagtcctaaaa 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tctgattctccactgggctagcttgggcagtgttttctatgtagtgacagagtcctaaaa 794
Query: 595 gc-aagtgcctatatgcaagaccttgagtctcatggcctgg 634
|| || ||||| |||||||||||||||||||||||||||||
Sbjct: 795 gctaa-tgcctgtatgcaagaccttgagtctcatggcctgg 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
