Query= MSMg01no540_o01.b1 MSMg01no540_o01.b1 CHROMAT_FILE:
MSMg01no540_o01.b1 PHD_FILE: MSMg01no540_o01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:18 2005
(550 letters)
>mm_chr7_143607730_143608681
Length = 952
Score = 1029 bits (532), Expect = 0.0
Identities = 544/548 (99%), Gaps = 2/548 (0%)
Strand = Plus / Plus
Query: 5 gaattcctttattttaaagattgcgactctcacctttaagctcccataactgttgaaaga 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttagtttaaagattgcgactctcacctttaagctcccataactgttgaaaga 264
Query: 65 tagaaaattaaaactacgtcacctcagctagtgtttttcaaaggggg-aaaaatacatta 123
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 tagaaaattaaaactacgtcacctcagctagtgtttttcaaagggggaaaaaatacatta 324
Query: 124 gtgaggtttacatctgttgcagggatgacagaatccattcggaaaaacctcacacaggta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgaggtttacatctgttgcagggatgacagaatccattcggaaaaacctcacacaggta 384
Query: 184 aacagccgctgtctggtgcagttaacactgtgccttattttggtaaaggctcccaaaggg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aacagccgctgtctggtgcagttaacactgtgccttattttggtaaaggctcccaaaggg 444
Query: 244 ccagggtttccaagcacacagagcttcaagaagaactgacccaggcaggtccctacacag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccagggtttccaagcacacagagcttcaagaagaactgacccaggcaggtccctacacag 504
Query: 304 gaggcaggggcctgagctcacaggaatcagcataatgtgcctactgcaaacaagaccctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaggcaggggcctgagctcacaggaatcagcataatgtgcctactgcaaacaagaccctt 564
Query: 364 cagcaataccaaacaaatcagacagccaagaatttttttt-cttgttcctaactttccca 422
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 565 cagcaataccaaacaaatcagacagccaagaatttttttttcttgttcctaactttccca 624
Query: 423 taaaaagatccaggtaaatgtagcatgacgagccaatttaagccaatttctaagttattt 482
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 625 taaaaagatccaggtaaatgtagcatgacgagccaatttaagccaatttcaaagttattt 684
Query: 483 gagtaattggttattaagataacagtctcaaatttcaattcagcaattattgccttaaag 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gagtaattggttattaagataacagtctcaaatttcaattcagcaattattgccttaaag 744
Query: 543 acacagaa 550
||||||||
Sbjct: 745 acacagaa 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 952
Length adjustment: 10
Effective length of query: 540
Effective length of database: 942
Effective search space: 508680
Effective search space used: 508680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no540_o01.g1 MSMg01no540_o01.g1 CHROMAT_FILE:
MSMg01no540_o01.g1 PHD_FILE: MSMg01no540_o01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:19 2005
(553 letters)
>mm_chr7_143776215_143777167
Length = 953
Score = 1046 bits (541), Expect = 0.0
Identities = 550/553 (99%)
Strand = Plus / Minus
Query: 1 taaaaatctcccacaggtgctatcctaaggacagtaattcaggcttctgccagttatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 taaaaatctcccacaggtgctatcctaaggacagtaattcaggcttctgccagttatgtt 694
Query: 61 tgaaataatgaaggcaaatcagaacttcccagaatgaggaaacatttgttagtctcaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tgaaataatgaaggcaaatcagaacttcccagaatgaggaaacatttgttagtctcaggt 634
Query: 121 tcctggtagaaaaatcccaaacagaatgttcgtaggattttatcttttgtttgctagtgt 180
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 633 acctggtagaaaaatcccaaacagaatgttcataggattttatcttttgtttgctagtgt 574
Query: 181 caagcctgcgctatccgctctcagagagaaaaggcgacctccttagaattatttgtttta 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 caagcctgcgctatccactctcagagagaaaaggcgacctccttagaattatttgtttta 514
Query: 241 tattacaaaacacactgatcagcttcatcaggcacccgaattttcattttccccctctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tattacaaaacacactgatcagcttcatcaggcacccgaattttcattttccccctctaa 454
Query: 301 atgtcaaaggcattccttttgcattaaataaaggcgagaagagaaaggagtccctgacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atgtcaaaggcattccttttgcattaaataaaggcgagaagagaaaggagtccctgacag 394
Query: 361 gttaccaggaattcaacacacaaataccatcaaagctgtatggggtccttctcagaatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gttaccaggaattcaacacacaaataccatcaaagctgtatggggtccttctcagaatca 334
Query: 421 tattacatacctatcgcagagctgggaatctttggggaacgttcattttcgctccagtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tattacatacctatcgcagagctgggaatctttggggaacgttcattttcgctccagtac 274
Query: 481 tgttcctgagtcccacctcctgtaacaatcatgggtgtcaggtagagttggactagacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tgttcctgagtcccacctcctgtaacaatcatgggtgtcaggtagagttggactagacag 214
Query: 541 gattaagctatca 553
|||||||||||||
Sbjct: 213 gattaagctatca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
