Query= MSMg01no541_c08.b1 MSMg01no541_c08.b1 CHROMAT_FILE:
MSMg01no541_c08.b1 PHD_FILE: MSMg01no541_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:41 2005
(354 letters)
>mm_chr7_58989423_58990176
Length = 754
Score = 656 bits (339), Expect = 0.0
Identities = 345/347 (99%)
Strand = Plus / Minus
Query: 5 gaattcttaaaactatagacactattttccaataggattgaattctgagatttgaagcag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gaattcttaaaactatagacactattttccaataggattgaattctgagatttgaagcag 430
Query: 65 atgtgaacttaggaaaagattatgaaaaatcgatacaataatcaatgtcaattttgaagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atgtgaacttaggaaaagattatgaaaaatcgatacaataatcaatgtcaattttgaagc 370
Query: 125 aaggagtagaataagctgatagtgataattcaggaagcaacagtattatgcagtgtctcc 184
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 369 aaggagtagaataagctgatagtgataattcaggaagcatcagtattatgcagtgtctcc 310
Query: 185 aaactcttaataagcacaggtgctctggctatttgaaaagtagcatagactagcgtggaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aaactcttaataagcacaggtgctctggctatttgaaaagtagcatagactagcgtggaa 250
Query: 245 tggtagttcaggtatcaggtaggagtgagaggaggtgataaacacatgatgatgaatgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tggtagttcaggtatcaggtaggagtgagaggaggtgataaacacatgatgatgaatgat 190
Query: 305 ggtggtggtggtggtgatgatgaaggtgatgttgatcatgatgatga 351
|||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 189 ggtggtggtggtggagatgatgaaggtgatgttgatcatgatgatga 143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no541_c08.g1 MSMg01no541_c08.g1 CHROMAT_FILE:
MSMg01no541_c08.g1 PHD_FILE: MSMg01no541_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:41 2005
(602 letters)
>mm_chr7_58871079_58872079
Length = 1001
Score = 1050 bits (543), Expect = 0.0
Identities = 586/603 (97%), Gaps = 8/603 (1%)
Strand = Plus / Plus
Query: 1 attctctatacgaatctgtgaaacaccatgagcaccaagcagaggtagccacggcttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 attctctatacgaatctgtgaaacaccatgagcaccaagcagaggtagccacggcttgtg 265
Query: 61 atttttccttctgcttctgttttcttttctcttctctttcttttcttctccctccttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atttttccttctgcttctgttttcttttctcttctctttcttttcttctccctccttctt 325
Query: 121 tctctctctttcattctttttttttttttttggagaaagggtcatattatgtagctttgg 180
|||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||
Sbjct: 326 tctctctctttcattc-----tttcttttttggagaaagggtcatattatgtagccttgg 380
Query: 181 ctggtcagaaattcagtatgtagatcaggctagatttgcattcacagacatccacctgcc 240
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||
Sbjct: 381 ctggtcagaaattcagtatgtagatcaggctagatttgtactcacagacatccacctacc 440
Query: 241 tct-gtttcctgagtgctgggattaaaggtgtgtgccactgtgcttggtggctacctcta 299
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 t-tggtttcctgagtgctgggattaaaggtgtgtgccactgtgcttggtggctacctcta 499
Query: 300 cattggcttctttaatagtgggagtgtgtttattttatattcatatagcttataccactt 359
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 500 cattggcttctttaatagtgggagtgtgtttattttatattcatatagcttgtaccactt 559
Query: 360 tttaacctcttatttttcacatatgcttatgtgagcagagcataacttttcctttaagga 419
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 560 ttt-acctcttatttttcacatatgcttatgtgagcagagcataccttttcctttaagga 618
Query: 420 gatactttttatggtttcatagaggccagtggattcaaacttcttttggaatttgttacc 479
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 619 gatactttttatgttttcatagagtccagtggattcaaacttcttttggaatttgttacc 678
Query: 480 aaggctgggtagggaatggtgactggggagttcaagcctgaaagtcctttcctggcatgg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aaggctgggtagggaatggtgactggggagttcaagcctgaaagtcctttcctggcatgg 738
Query: 540 aacataattgctctttgtattgtttctggcagtggtttctgttttcttcaaaacatgggc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aacataattgctctttgtattgtttctggcagtggtttctgttttcttcaaaacatgggc 798
Query: 600 tat 602
|||
Sbjct: 799 tat 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1001
Length adjustment: 10
Effective length of query: 592
Effective length of database: 991
Effective search space: 586672
Effective search space used: 586672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
