NTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTAAACTGTTATTCCCCAAATAACCAGCCAGCCCTTGTCCCACCA
GCTAAGGGGTTTCTACAGTTGGGAAAGTTGAAAACCTTGAGGAGTTAAAC
TAAGAATTGTAATATAAATAACCAGCATTTATTTACCCTCCACAAGCACA
GAGCCCAGTTTACTAGATACTAACATGTGGATCATTTGGTATCCAAAAGA
CCCACTCAGGGGCTGGAGAAATGGCTCAGTGGTTAAGAGCACTGACTGCT
CTACCAGAGGTCCTGAGTTCAATTCCCAGCCCCCAAATGGCAGCTCAAAA
CTGTCTGTAGCTTCAGTTTCAGATAATCTGTTGCCCTCACATAGACACAT
GTGCAGGCAAAACACATAAAAGTAAGTAAATAAATAAGTAAACAAACACA
CATGAAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA
GATAGATAGATAGATAGATAGATAGATAGATAGATAAATGGACCTGCTCA
GCTTCTCAGGCAGTTTCTCTCTCCTTGTCTAGGGTTAAGGTGACAGAAGC
AGGGAAGACCATGGTTAGACAGGCACCTTGGCACCTGACTCTCCATGTTT
CGACCCAGCTTCTGCTGACTCTTGCCACTGTTGTTTTTGCTTCCCAGTGA
CTGATTTTTCAGAATAGTCCAGCGAGAGCACATCAGATTCCAGGTGCCTG
GTACCTCCCACAGATG

CCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTCTTTATGTCCTCTACCATCATCA
TGAGATATGCTTTTAAATCCAGGTCTACCTTTTCAGGTGTGTTAGGGTGT
CCTGGATTGGGCGAAGTGGGCGTTCTGGGTTCTGATGATGGTGAGTGGTC
CTGGCTTCTGTTAGTAGGATTCTTACGTTTACCTTTCGCCATCTGGCAAT
CTCTGGAGTTAGTTGTTATAGTTGTCTTTGTTAAAAGATTGTTCCTCTGT
TGATTTTGTTACCCTCTATCAGCAGGCGTGGGAGACAAGCTCTCTTCTCT
GAGTTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTCTCAGG
GAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGGTGAA
GGCCCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGGAAGG
TGGCCAGTTGTCTGGAGTCGAAGATGTCGCAGCCTCAGAAGCTCTGTGGC
TCTTGCCGGGAAGGTGGCTGGTTGTCTGGAGCTGAGGATGGTGCCGCCCC
AGAATCTCTGCGACTCTCTTGCCCGTCCCAGAAACAGCTGGCACTCTGTA
TTCCACACGGTCACCCGTGCAGCCTGCCCTCCGCGGAGTCCCGGAGCCAA
GAAAGCTCCCGCCGGCGCCTGTTGCACAAACCTCTCATGCCAGGCAGACC
TCGTGCTCTCACCAGAAAGTG

Query= MSMg01no541_f24.b1 MSMg01no541_f24.b1 CHROMAT_FILE:
MSMg01no541_f24.b1 PHD_FILE: MSMg01no541_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:00 2005
         (661 letters)



>mm_chr7_130571663_130572723
          Length = 1061

 Score = 1067 bits (552), Expect = 0.0
 Identities = 624/658 (94%), Gaps = 18/658 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttaaactgtta-ttccccaaataaccagccagcccttgtcccaccagctaagg 63
           |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttaaactgc-agttccccaaataaccagccagcccttgtcccaccagctaagg 263

                                                                       
Query: 64  ggtttctacagttgggaaagttgaaaaccttgaggagttaaactaagaattgtaatataa 123
           ||||||| ||||||||||||||||||||||||| |||||||| ||| |||||||| ||||
Sbjct: 264 ggtttctgcagttgggaaagttgaaaaccttgaagagttaaagtaataattgtaacataa 323

                                                                       
Query: 124 ataaccagcatttatttaccctccacaagcacagagcccagtttactagatactaacatg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataaccagcatttatttaccctccacaagcacagagcccagtttactagatactaacatg 383

                                                                       
Query: 184 tggatcatttggtatccaaaagacccactcaggggctggagaaatggctcagtggttaag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tggatcatttggtatccaaaagacccactcaggggctggagaaatggctcagtggttaag 443

                                                                       
Query: 244 agcactgactgctctaccagaggtcctgagttcaattcccagcccccaaatggcagctca 303
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 444 agcactgactgctctaccagaggtcctgagttcaaatcccagcccccaaatggcagctca 503

                                                                       
Query: 304 aaactgtctgtagcttcagtttcagataatctgttgccctcacatagacacatgtgcagg 363
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaactgtctgtagctttagtttcagataatctgttgccctcacatagacacatgtgcagg 563

                                                                       
Query: 364 caaaacacataaaagtaagtaaataaataagtaaacaaacacacatgaagatagatagat 423
           |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||||||
Sbjct: 564 caaaacacataaaagtaaataagtaagtaaataaacaaacacacatgaagatagatagat 623

                                                                       
Query: 424 agatagatagatagatagatagatagatagatagatagatagatagatagatagatagat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 624 agatagatagatagatagatagatagatagatagatagatagatagatagatagat---- 679

                                                                       
Query: 484 agatagataaatggacctgctcagcttctcaggcagtttctctctccttgtctagggtta 543
                       |||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 680 ------------ggacctgctcagcttcccgggcagtttctctctccttgtctagggtta 727

                                                                       
Query: 544 aggtgacagaagcagggaagaccatggttagacaggcaccttggcacctgactctccatg 603
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 aggtgacagaggcagggaagaccatggttagacaggcaccttggcacctgactctccatg 787

                                                                     
Query: 604 tttcgacccagcttctgctgactcttgccactgttgtttttgcttcccagtgactgat 661
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tttcgacccagcgtctgctgactcttgccactgttgtttttgcttcccagtgactgat 845


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space:   684201
Effective search space used:   684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)