Query= MSMg01no542_b22.b1 MSMg01no542_b22.b1 CHROMAT_FILE:
MSMg01no542_b22.b1 PHD_FILE: MSMg01no542_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:02 2005
(640 letters)
>mm_chr7_146408990_146410026
Length = 1037
Score = 1195 bits (618), Expect = 0.0
Identities = 629/634 (99%), Gaps = 3/634 (0%)
Strand = Plus / Plus
Query: 7 gaattctaggccagtctgggcaatagtagagtgagcccctgtatccacagaaacagaaga 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctaggccagtctgggcaatagtagagtgagcccctgtatccacagaaacagaaga 266
Query: 67 ataaacaactgtcaattctcattacccatttccccatctttttctcctcatcctcttctt 126
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 267 ataaacaactgtcaattctcattacccatttccccatcttttt---ctcatcctcttctt 323
Query: 127 catcctcttccttcttctgagccagtcttttgtagcccaagctggctcaggaactccccg 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catcctcttccttcttctgagccagtcttttgtagcccaagctggctcaggaactcccca 383
Query: 187 tatcgctgaagataacgttgaactcaggagttccctgactccacctgccttcctctccct 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatcgctgaagataacgttgaactcaggagttccctgactccacctgccttcctctccct 443
Query: 247 cctgagtccctctccaagaagtgggcagaggactgaaatttcccctccactccagggcag 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cctgagtccctctccaagaagtgggcagaggactgaaatttcccctccactccagggcag 503
Query: 307 gtcactacactgacagcactgaacctgagacactgccctctggaatttcctcctcgcctg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtcactacactgacagcactgaacctgagacactgccctctggaatttcctcctcgcctg 563
Query: 367 attgtgcagaaaggcttggtagccatcctcaccttcctacgcatctgctcagtggagaag 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attgtgcagaaaggcttggtagccatcctcaccttcctacgcatctgctcagtggagaag 623
Query: 427 gccttccctggagatgagttgcttccaggtttgtagagaattttctgtcactagatgaga 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gccttccctggagatgagttgcttccaggtttgtagagaattttctgtcactagatgaga 683
Query: 487 cctaggagtgtgtgtggcttccccagcttctgtagggctcgcatggcaaagactagccca 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cctaggagtgtgtgtggcttccccagcttctgtagggctcgcatggcaaagactagccca 743
Query: 547 tacactggcccaaacaccgtgccttgccctggctcagatccactctgagcagtacacgcc 606
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tacactggcccaaacaccatgccttgccctggctcagatccactctgagcagtacacgcc 803
Query: 607 tgtttgggtaggcgaggtaagagtccatgggata 640
||||||||||||||||||||||||||||||||||
Sbjct: 804 tgtttgggtaggcgaggtaagagtccatgggata 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1037
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1027
Effective search space: 647010
Effective search space used: 647010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_b22.g1 MSMg01no542_b22.g1 CHROMAT_FILE:
MSMg01no542_b22.g1 PHD_FILE: MSMg01no542_b22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:02 2005
(632 letters)
>mm_chr7_146546473_146547504
Length = 1032
Score = 704 bits (364), Expect = 0.0
Identities = 380/386 (98%), Gaps = 2/386 (0%)
Strand = Plus / Minus
Query: 1 aaaaggggaaagcctgggcccagggtgttagaagctcagggtgcagagatagttgaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaaaggggaaagcctgggcccagggtgttagaagctcagggtgcagagatagttgaattc 325
Query: 61 caagcagtttacaagctgaacatcagcgaggaaaatgctcagcccagtaaatactaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caagcagtttacaagctgaacatcagcgaggaaaatgctcagcccagtaaatactaagga 265
Query: 121 tggatttgatgaaattctcatttacacacagtattctttttaaagaatttcagtagggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggatttgatgaaattctcatttacacacagtattctttttaaagaatttcagtagggta 205
Query: 181 gctatggtggggcacagttttaatcccagtattgagaggcagaagtcggcggttctctgt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 204 gctatggtggggcacagttttaatcccagtattgagaggcagaagtaggcggttctctgt 145
Query: 241 gacttcaaggccaacctgatctacatggtgagttccttcttagcaaaggctatagtgaga 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 144 gacttcaaggccaacctgatctacacggtgagttccttcttagcaaaggctatagtgaga 85
Query: 301 ccttctcttggaaagaaaagttttatttcatggtgtgtgtgcgcgcgcatgtgtgtgtgt 360
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 84 ccttctcttggaaagaaaagttttatttcatggtgtgtgtgcgcgcgcatatatgtgtgt 25
Query: 361 gtgtgtgtgtgtgtgtgtgtgcgcac 386
||||||||||||||||||| |||||
Sbjct: 24 gtgtgtgtgtgtgtgtgtg--cgcac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
