Query= MSMg01no542_c23.b1 MSMg01no542_c23.b1 CHROMAT_FILE:
MSMg01no542_c23.b1 PHD_FILE: MSMg01no542_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:08 2005
(658 letters)
>mm_chr7_146408992_146410046
Length = 1055
Score = 1234 bits (638), Expect = 0.0
Identities = 649/654 (99%), Gaps = 3/654 (0%)
Strand = Plus / Plus
Query: 5 gaattctaggccagtctgggcaatagtagagtgagcccctgtatccacagaaacagaaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaggccagtctgggcaatagtagagtgagcccctgtatccacagaaacagaaga 264
Query: 65 ataaacaactgtcaattctcattacccatttccccatctttttctcctcatcctcttctt 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 265 ataaacaactgtcaattctcattacccatttccccatcttttt---ctcatcctcttctt 321
Query: 125 catcctcttccttcttctgagccagtcttttgtagcccaagctggctcaggaactccccg 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 catcctcttccttcttctgagccagtcttttgtagcccaagctggctcaggaactcccca 381
Query: 185 tatcgctgaagataacgttgaactcaggagttccctgactccacctgccttcctctccct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tatcgctgaagataacgttgaactcaggagttccctgactccacctgccttcctctccct 441
Query: 245 cctgagtccctctccaagaagtgggcagaggactgaaatttcccctccactccagggcag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cctgagtccctctccaagaagtgggcagaggactgaaatttcccctccactccagggcag 501
Query: 305 gtcactacactgacagcactgaacctgagacactgccctctggaatttcctcctcgcctg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gtcactacactgacagcactgaacctgagacactgccctctggaatttcctcctcgcctg 561
Query: 365 attgtgcagaaaggcttggtagccatcctcaccttcctacgcatctgctcagtggagaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 attgtgcagaaaggcttggtagccatcctcaccttcctacgcatctgctcagtggagaag 621
Query: 425 gccttccctggagatgagttgcttccaggtttgtagagaattttctgtcactagatgaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gccttccctggagatgagttgcttccaggtttgtagagaattttctgtcactagatgaga 681
Query: 485 cctaggagtgtgtgtggcttccccagcttctgtagggctcgcatggcaaagactagccca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 cctaggagtgtgtgtggcttccccagcttctgtagggctcgcatggcaaagactagccca 741
Query: 545 tacactggcccaaacaccgtgccttgccctggctcagatccactctgagcagtacacgcc 604
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tacactggcccaaacaccatgccttgccctggctcagatccactctgagcagtacacgcc 801
Query: 605 tgtttgggtaggcgaggtaagagtccatgggataaggcaagtggagcagtcttt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tgtttgggtaggcgaggtaagagtccatgggataaggcaagtggagcagtcttt 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1055
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1045
Effective search space: 677160
Effective search space used: 677160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_c23.g1 MSMg01no542_c23.g1 CHROMAT_FILE:
MSMg01no542_c23.g1 PHD_FILE: MSMg01no542_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:08 2005
(612 letters)
>mm_chr7_146546473_146547484
Length = 1012
Score = 704 bits (364), Expect = 0.0
Identities = 380/386 (98%), Gaps = 2/386 (0%)
Strand = Plus / Minus
Query: 1 aaaaggggaaagcctgggcccagggtgttagaagctcagggtgcagagatagttgaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaaaggggaaagcctgggcccagggtgttagaagctcagggtgcagagatagttgaattc 325
Query: 61 caagcagtttacaagctgaacatcagcgaggaaaatgctcagcccagtaaatactaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caagcagtttacaagctgaacatcagcgaggaaaatgctcagcccagtaaatactaagga 265
Query: 121 tggatttgatgaaattctcatttacacacagtattctttttaaagaatttcagtagggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggatttgatgaaattctcatttacacacagtattctttttaaagaatttcagtagggta 205
Query: 181 gctatggtggggcacagttttaatcccagtattgagaggcagaagtcggcggttctctgt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 204 gctatggtggggcacagttttaatcccagtattgagaggcagaagtaggcggttctctgt 145
Query: 241 gacttcaaggccaacctgatctacatggtgagttccttcttagcaaaggctatagtgaga 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 144 gacttcaaggccaacctgatctacacggtgagttccttcttagcaaaggctatagtgaga 85
Query: 301 ccttctcttggaaagaaaagttttatttcatggtgtgtgtgcgcgcgcatgtgtgtgtgt 360
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 84 ccttctcttggaaagaaaagttttatttcatggtgtgtgtgcgcgcgcatatatgtgtgt 25
Query: 361 gtgtgtgtgtgtgtgtgtgtgcgcac 386
||||||||||||||||||| |||||
Sbjct: 24 gtgtgtgtgtgtgtgtgtg--cgcac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
