Query= MSMg01no542_f13.b1 MSMg01no542_f13.b1 CHROMAT_FILE:
MSMg01no542_f13.b1 PHD_FILE: MSMg01no542_f13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:21 2005
(652 letters)
>mm_chr7_121035745_121036796
Length = 1052
Score = 1164 bits (602), Expect = 0.0
Identities = 636/648 (98%), Gaps = 3/648 (0%)
Strand = Plus / Plus
Query: 5 gaattctagttttatgattaattttctctcatagttacaagttccaaccttgtcttactt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagttttatgattaattttctctcatagttacaagttccaaccttgtcttactt 264
Query: 65 tagacaagtcatcttactcttcttctatcagctactaaggtgatgtcaggactcctgaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagacaagtcatcttactcttcttctatcagctactaaggtgatgtcaggactcctgaaa 324
Query: 125 acagagaaagcactggaattaaaaaccacgtgtaaataatataataataatccaccagga 184
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 325 acagagaaagcactggaattaaaaaccacatgtaaataatataataataatccaccagga 384
Query: 185 ctgccttcaacttcttcatatctccatgcaggaacaagtagtttctgggttttgattctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgccttcaacttcttcatatctccatgcaggaacaagtagtttctgggttttgattctc 444
Query: 245 tttaatctgatgttaatctcaaattaagtagttgtgtacccccgtgtctattagaaactc 304
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 tttaatctgatgttaatctcaaattaactagttgtgtacccccgtgtctattagaaactg 504
Query: 305 atagttggtagatggagagacccatagccagacattaggttgatcttggcaaactccaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 505 atagttggtagatggagagacccatagccagacattaggttgatcttggcagactccaag 564
Query: 365 gaagagtaggaggaaggattgtaggtgccagaggggtcaaggagaccatgagagcattgc 424
|| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 565 gaggagtaggaggaaggattgtaggtgccagaggggtcaaggacaccatgagagcattgc 624
Query: 425 atcatggcattgttatctctcttctacagaatcaactaagcagggctcataggggctcac 484
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atcatggcattgtta-ctctcttctacagaatcaactaagcagggctcataggggctca- 682
Query: 485 agagactgaggtgataatcaggaagcctgcatgggtctgacctagggcctttacagatat 544
||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 683 -gaggctgaggtgataatcagggagcctgtatgggtctgacctagggcctttacagatat 741
Query: 545 gttgtgattgtttacctcggtgttcttgtgggactcctgacagtgggagcagggggctgg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gttgtgattgtttacctcggtgttcttgtgggactcctgacagtgggagcagggggctgg 801
Query: 605 ctctgactctcttgcctgctcttaggacccttttcctcctactgggtt 652
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ctctgactctcttgcctgctcttaggacccttttcctcctactgggtt 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_f13.g1 MSMg01no542_f13.g1 CHROMAT_FILE:
MSMg01no542_f13.g1 PHD_FILE: MSMg01no542_f13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:21 2005
(686 letters)
>mm_chr7_121110039_121111124
Length = 1086
Score = 808 bits (418), Expect = 0.0
Identities = 430/434 (99%)
Strand = Plus / Minus
Query: 1 tcacttggtttattggcagaaaccttactcaagaaggaatagaatggtaagacctcccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tcacttggtttattggcagaaaccttactcaagaaggaatagaatggtaagacctcccaa 375
Query: 61 ctagcctttagagatgatggaggaaataaagacctcttagactcattggagctcatgact 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 atagcctttagagatgatggaggaaataaagacctcttagactcattggagctcatgact 315
Query: 121 accaggttagcttcacaggaaggtttatgagagtcctgtatccatacgcaaagataaagt 180
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 314 accaggttagcttcacaggaaggtttttgagagtcctgtatccagacgcaaagataaagt 255
Query: 181 agttgccacctttaaagcatgtggaagtataacccctactaggagagtagatacaggaag 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agttgccaccttgaaagcatgtggaagtataacccctactaggagagtagatacaggaag 195
Query: 241 gaaaacagagactgaaacgttactgacagagtgaggaagcacaaagacaaaccggagaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gaaaacagagactgaaacgttactgacagagtgaggaagcacaaagacaaaccggagaga 135
Query: 301 acagtaggaacaaagaagatgcagaacagaggaagactcaccaaaatggcaggaataagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 acagtaggaacaaagaagatgcagaacagaggaagactcaccaaaatggcaggaataagt 75
Query: 361 ctttaactatcactggtaactttgagctcaggtctccaaacaagcaaaattcatctaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 ctttaactatcactggtaactttgagctcaggtctccaaacaagcaaaattcatctaaat 15
Query: 421 ggataaaaggttga 434
||||||||||||||
Sbjct: 14 ggataaaaggttga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
