AGGACCATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCCGCACGTCCCGAGCTACAAAGTGGCTCGTCTGGGATGGGGT
CAGGGAGCACTGGGTTGGGAGTGGGGGTAGAGAGGTGAGGGGATGGGAGG
TCTCCCCCCCTGTCCTTGTCTCTCCCCTCCTATTCTCCTCCCTTTCCTTG
CTCTTTCCCCTGCCTCCCATCCTCTCCCCTTCTTCCTCCCTCTCTCCTCT
GCCTTCCCCTTCTTCTCCTTCTTCCCTTCCCCCTCCCTTTCCTTCTTCTT
TTCTTCTCTCTTTTCCCTCCTTCCTCTTTTTTTTTCCCTCATCTCTTCTC
CCTCCCTTCTCCTTCCTTTCCCCCCTCCTCCCCCCTCTTTCTTTTTCCTC
TTCCTCCCTTCTTTTCTTTCTCTCTCCTCCCTCTTCCCTTCTCCCCTTCT
TCTTCTCCTTTTCCTCCCCTCCCTCTCTCCTCCTCCCCCTCTCTCTCTCT
TCCCCCCCTCTTCCCCCCCCCCCCCTTCCTCTTTCCCCCCTTCCCCCTCC
CTCTCCCCCTTTTCCCCCTCCCCCCCCCCTTCTTTCCCCCCCCTTCCCCC
CCTTCCCCTTTCCCTCCTTTCCCCTCCCTTCCCCCCTCCCTCTCCTCCTC
TTCCTCTCCTCTCCTCCCCCCCCCCTCCCCCTTTTCTCCCCTCCCTTTTT
CCTTTTCTCTCCCCTTCTTTCCCTCTCACCCTCTTCTTCCCTCCCCCCTT
TCCTTTTTTCTCCCCTTCCCCTTTTCCCCCTCTTCCCCCCTTCTTTTCTC
TCTCCCCCCTCTTTCCCTTTTTTTTTCCCCCCC

NNNNCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTATCAAAGGAAAGTCA
AGGCTTTCGTAAGAAATGAAAGGTTCTTAAAAATGACAGAAACATTGCAG
TATCAAACAGAGATTGTTCCAAAAGTGAAAGGGGCCAAGCAGTGCCCAGC
AACTACATCCTTTTAAGAAAGACAAACTGGAGAACAAGAAGAAACAAAAC
ATCCGGCGATCCTGATGTTATCACTTCTCTACAGCAGAAAGGCCTCCTGC
TCACGTTTTCCAAGCTATGTGCTTTGTGATCCAAATAATATTACACAAGG
AAATAAAACCATCTGTGAGGAACATTAATTCACCATGGCTTGGTTACCAC
GGAATTCTTCTCAATCTCTCCGCAGATAACTTTAAAACTAAATGAACTAA
GCCAAAAGTAGCTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGNNNNNNNNNNNNNNNNTNNNNTTNTTTTTTTTTTTTT
TTTTTTTTTTTTNTTTTTTTTTTNNTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTNTNTTTTTNNTTTTTTTTTTTTTTNTTTTTTTTTTT
TTTTTTTTTTTNNTTTTTTNTTTTTTTTTTTTTTTTTTTTTNNNTTTTNT
TTTTTTTTTTTTTTTTTTTTTTTTNNTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTT

Query= MSMg01no543_a03.g1 MSMg01no543_a03.g1 CHROMAT_FILE:
MSMg01no543_a03.g1 PHD_FILE: MSMg01no543_a03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:14 2005
         (433 letters)



>mm_chr7_75188819_75189651
          Length = 833

 Score =  804 bits (416), Expect = 0.0
 Identities = 425/428 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctatcaaaggaaagtcaaggctttcgtaagaaatgaaaggttcttaaaaatgacagaaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ctatcaaaggaaagtcaaggctttcgtaagaaatgaaaggttcttaaaaatgacagaaac 524

                                                                       
Query: 61  attgcagtatcaaacagagattgttccaaaagtgaaaggggccaagcagtgcccagcaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 attgcagtatcaaacagagattgttccaaaagtgaaaggggccaagcagtgcccagcaac 464

                                                                       
Query: 121 tacatccttttaagaaagacaaactggagaacaagaagaaacaaaacatccggcgatcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tacatccttttaagaaagacaaactggagaacaagaagaaacaaaacatccggcgatcct 404

                                                                       
Query: 181 gatgttatcacttctctacagcagaaaggcctcctgctcacgttttccaagctatgtgct 240
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gacgttatcacttctctacagcagaaaggcctcctgctcacgttttccaagctatgtgct 344

                                                                       
Query: 241 ttgtgatccaaataatattacacaaggaaataaaaccatctgtgaggaacattaattcac 300
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttgtgatccaaataatattatacaaggaaataaaaccatctgtgaggaacattaattcac 284

                                                                       
Query: 301 catggcttggttaccacggaattcttctcaatctctccgcagataactttaaaactaaat 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 catggcttggctaccacggaattcttctcaatctctccgcagataactttaaaactaaat 224

                                                                       
Query: 361 gaactaagccaaaagtagctggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gaactaagccaaaagtagctggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 164

                   
Query: 421 tgtgtgtg 428
           ||||||||
Sbjct: 163 tgtgtgtg 156


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space:   349376
Effective search space used:   349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)