Query= MSMg01no543_j22.b1 MSMg01no543_j22.b1 CHROMAT_FILE:
MSMg01no543_j22.b1 PHD_FILE: MSMg01no543_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:03 2005
(638 letters)
>mm_chr7_73967209_73968246
Length = 1038
Score = 1197 bits (619), Expect = 0.0
Identities = 628/631 (99%)
Strand = Plus / Plus
Query: 8 aagagacaaccctggctgaactttgtgtgagaagctccatcttaaaaatggctcttaatg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aagagacaaccctggctgaactttgtgtgagaagctccatcttaaaaatggctcttaatg 267
Query: 68 tgtaagatacccggaggtacaaaggcccagaagtctgtttctgtttgtgactatgttgtt 127
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 268 tgtaagatacccggaggtacaaaggcccagaagtttgtttctgtttgtgactatgttgtt 327
Query: 128 tccagggataattctcagatgagcccagagccttcctggcagggtcctggcgtagaggga 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tccagggataattctcagatgagcccagagccttcctggcagggtcctggcgtagaggga 387
Query: 188 cgtgagtttcggtgtcaagctgccctgtgctgtcagccccgatccccatcctcaggctca 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cgtgagtttcggtgtcaagctgccctgtgctgtcagccccgatccccatcctcaggctca 447
Query: 248 cagagatgccatgggctgagacggtcactcgggagccactgaggagcgtgggggggtccc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cagagatgccatgggctgagacggtcactcgggagccactgaggagcgtgggggggtccc 507
Query: 308 ggagaggttgctcactgagccatattacccaggaagccagccccagggtggcatgcatgg 367
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 508 ggagaggttgctcactgagccatattacccaggaagccagccccagggtggcatgcctgg 567
Query: 368 gagcttcaaattctgaaggaactcttagaagcggaaagaggaagccatgctgtggtctca 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gagcttcaaattctgaaggaactcttagaagcggaaagaggaagccatgctgtggtctca 627
Query: 428 ggatctaacacattctgaccactgcgcagtgaagaacccagcaggccgccaggcacccta 487
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 628 ggatctaacacattctgaccactgcgcagtgaagaacccagaaggccgccaggcacccta 687
Query: 488 agtcacaaaggtcctgtgcgcactaaatggtctgagagtttcagtttttaatttttaaaa 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 agtcacaaaggtcctgtgcgcactaaatggtctgagagtttcagtttttaatttttaaaa 747
Query: 548 ttgcgtgtttttaaaaccttcaggctaagcaaatacgagcaaacaaacaaaaactcttca 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ttgcgtgtttttaaaaccttcaggctaagcaaatacgagcaaacaaacaaaaactcttca 807
Query: 608 gaattctgttcccaacaaagtatcttgttaa 638
|||||||||||||||||||||||||||||||
Sbjct: 808 gaattctgttcccaacaaagtatcttgttaa 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no543_j22.g1 MSMg01no543_j22.g1 CHROMAT_FILE:
MSMg01no543_j22.g1 PHD_FILE: MSMg01no543_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:03 2005
(596 letters)
>mm_chr7_74141185_74142178
Length = 994
Score = 692 bits (358), Expect = 0.0
Identities = 382/390 (97%), Gaps = 3/390 (0%)
Strand = Plus / Minus
Query: 208 ccaggagaagcaagccagtaaag-aacatccctccatggcctctgcatcagctcctgctt 266
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 994 ccaggagaagcaagccagtaaagaaacatctctccatggcctctgcatcagctcctgctt 935
Query: 267 tcttacctgcttgagttccagtcctgacttcctttggtgatgaacagcagggtggaaatg 326
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 tctgacctgcttgagttccagtcctgacttcctttggtgatgaacagcagggtggaaatg 875
Query: 327 taagccgaataaaccctttcctccccaacttgcttcttggtcatcatgtttgtgcaggaa 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 taagccgaataaaccctttcctccccaacttgcttcttggtcatcatgtttgtgcaggaa 815
Query: 387 tagaaaccctgactaagacaataggtcatggtgactataaaggagacagtgactttattc 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 tagaaaccctgactaagacaataggtcatggtgactataaaggagacagtgactttattc 755
Query: 447 attttaggcacatttatccacaggagtaaaggtattcagtagcctctgggctgctaactt 506
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 754 attttaggcacatttatccacaggagtaaaggaattcagtagc-tctgggctgctaactt 696
Query: 507 aggcgccctgaaggcatcatgacacaggagacaggtatagtaacttagaagaaatgctca 566
|||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 aggcacc-tgaaggtatcatgacacaggagacaggtatagtaacttagaagaaatgctca 637
Query: 567 gggtggggctaagagatggctcatttgtaa 596
||||||||||||||||||||||||||||||
Sbjct: 636 gggtggggctaagagatggctcatttgtaa 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 994
Length adjustment: 10
Effective length of query: 586
Effective length of database: 984
Effective search space: 576624
Effective search space used: 576624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
