Query= MSMg01no544_b18.b1 MSMg01no544_b18.b1 CHROMAT_FILE:
MSMg01no544_b18.b1 PHD_FILE: MSMg01no544_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:40 2005
(678 letters)
>mm_chr7_144489357_144490432
Length = 1076
Score = 1261 bits (652), Expect = 0.0
Identities = 668/674 (99%), Gaps = 2/674 (0%)
Strand = Plus / Minus
Query: 5 gaattcaacgtttgttgttcttgttggcttttttggtttaataaattaaactacaaattt 64
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 gaattcaatgtttggtgttcttgttggcttttttggtttaataaattaaactacaaattt 817
Query: 65 tcctaattgccaaacaaaatgttaggccagctttagccattgctgacagtaaaacagaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 tcctaattgccaaacaaaatgttaggccagctttagccattgctgacagtaaaacagaac 757
Query: 125 ataaagcctgctgagagttatatgtggtatttaatccgagacagagcagtgctcgggctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ataaagcctgctgagagttatatgtggtatttaatccgagacagagcagtgctcgggctt 697
Query: 185 ttacggttaagtatgaattcgcaccaacagcatttgtttcacattagggaaggtttgtaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ttacggttaagtatgaattcgcaccaacagcatttgtttcacattagggaaggtttgtaa 637
Query: 245 atcagatcagtgtgctgggacggggtggccgggtggcctctcttcttgatatttggttgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 atcagatcagtgtgctgggacggggtggccgggtggcctctcttcttgatatttggttgt 577
Query: 305 cgggcatgtggccagagccggttccccatccacttccacattctcaatgaagcgataagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cgggcatgtggccagagccggttccccatccacttccacattctcaatgaagcgataagc 517
Query: 365 cccctgacacccggaagattgggtcaggaaacaagttggggattgggttggatgaacggt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cccctgacacccggaagattgggtcaggaaacaagttggggattgggttggatgaacggt 457
Query: 425 gtgtccccaccatgagaggtcaccagtctgagctggccactgggcagcagccatcagtta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gtgtccccaccatgagaggtcaccagtctgagctggccactgggcagcagccatcagtta 397
Query: 485 cccagacatcggctgctgtgggtccccggccaggggaggccccagggagagagaagcagg 544
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 396 cccagacatcggctgctgtgggtccccggccaggggaggccccagg--gagagaagcagg 339
Query: 545 acctgggagagtgcttcacggagagcagcagtccctgccatttattaaacgtgacaagcg 604
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 338 acctgggagagtgcttcacggagagcggtagtccctgccatttattaaacgtgacaagcg 279
Query: 605 ggctctaaatataacggtcctttccccaaagatcattactttgaacaaataatgagtcat 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ggctctaaatataacggtcctttccccaaagatcattactttgaacaaataatgagtcat 219
Query: 665 gcaagttactacac 678
||||||||||||||
Sbjct: 218 gcaagttactacac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1076
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1066
Effective search space: 712088
Effective search space used: 712088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_b18.g1 MSMg01no544_b18.g1 CHROMAT_FILE:
MSMg01no544_b18.g1 PHD_FILE: MSMg01no544_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:40 2005
(520 letters)
>mm_chr7_144316350_144317269
Length = 920
Score = 967 bits (500), Expect = 0.0
Identities = 515/520 (99%)
Strand = Plus / Plus
Query: 1 cacttctcatcccatgcagctcctgtctgtagagtcagctctctccttcctggtcttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacttctcatcccatgcagctcctgtctgtagagtcagctctctccttcctggtcttcat 260
Query: 61 ggcggttgtccttaaaattactcatagaccacatctgtacttgtcatggtgatagccaaa 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 ggcggttgtctttaaaattactcatagaccacatctgtacttgtcatggtgatagacaaa 320
Query: 121 cttggagtcaaagcagggtagtgtctgtgaagttggaagtcatgtcctccacctcccaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttggagtcaaagcagggtagtgtctgtgaagttggaagtcatgtcctccacctcccaag 380
Query: 181 cagtgatccacaggtccacagagtcccatcgccatgtcagtcactggacaagagaggcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtgatccacaggtccacagagtcccatcgccatgtcagtcactggacaagagaggcat 440
Query: 241 caggaagacaggcagctccagactcctgctggttagaactggttttgccttctaagagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggaagacaggcagctccagactcctgctggttagaactggttttgccttctaagagcc 500
Query: 301 tggtgagccatcaagcaagagaagctcctcctcagggctgagggctggaatgaccccatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggtgagccatcaagcaagagaagctcctcctcagggctgagggctggaatgaccccatc 560
Query: 361 tgctgggtcatgtgtgctgcaccccagctagagtccgctaggttcaacaggcgaaccatg 420
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 561 tgctgggtcatgtgtgctgcaccccagctagagtccgataggttcagcaggcgaaccatg 620
Query: 421 tggctgaaggcatggtggtgaccgtggcacacatggctgcccacaggaaggctttgaaca 480
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggctgaaggcatggtggtgatcgtggcacacatggctgcccacaggaaggctttgaaca 680
Query: 481 gcaaggaagcagcaacagtgggatgcactgattctgagct 520
||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcaaggaagcagcaacagtgggatgcactgattctgagct 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
