Query= MSMg01no544_o18.b1 MSMg01no544_o18.b1 CHROMAT_FILE:
MSMg01no544_o18.b1 PHD_FILE: MSMg01no544_o18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:45 2005
(523 letters)
>mm_chr7_136964763_136965685
Length = 923
Score = 973 bits (503), Expect = 0.0
Identities = 518/523 (99%)
Strand = Plus / Minus
Query: 1 tttgacaacaaaggggttccaaggctacgagattgtcagcaaggtccaccctatccaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tttgacaacaaaggggttccaaggctacgagattgtcagcaaggtccaccctatccaggc 664
Query: 61 tgcacaggtagctctgcccacccctcaacactgatttttttaagaaactactggcacgtc 120
|||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 663 tgcacaagtagccctgcccacccctcaacactgatttttttaagaaactactagcacgtc 604
Query: 121 agaagctaatggtgacaagactgaggatctttgatggtatgaatgacagaaaaacttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 agaagctaatggtgacaagactgaggatctttgatggtatgaatgacagaaaaacttatt 544
Query: 181 caaggtgtattcagtccaatgagaatctatgtttacttttaagccaatagtacagaatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 caaggtgtattcagtccaatgagaatctatgtttacttttaagccaatagtacagaatac 484
Query: 241 atttggcttgacttgggctcgcaccatataactaggtttgtatcaaagacttgactcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 atttggcttgacttgggctcgcaccatataactaggtttgtatcaaagacttgactcctt 424
Query: 301 cctaggactctttactaattctatgtgccaaagctggaaggatttcctttgggccaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cctaggactctttactaattctatgtgccaaagctggaaggatttcctttgggccaagaa 364
Query: 361 tgcccagtaaaactggcaattccttctgactgaaccagccgagcaccatctctgtttctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgcccagtaaaactggcaattccttctgactgaaccagccgagcaccatctctgtttctg 304
Query: 421 ctgatgccctgagatgggacaagaggcgggactgcatggccgggcttagaagctccactc 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 303 ctgatgccctgagatgggacaagaggtgggactgcatggccgggcttagaagctccactc 244
Query: 481 attccgtatagctgggagagaatagcaggcaatatccccaaac 523
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 243 attccgtgtagctgggagagaatagcaggcaatatccccaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_o18.g1 MSMg01no544_o18.g1 CHROMAT_FILE:
MSMg01no544_o18.g1 PHD_FILE: MSMg01no544_o18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:45 2005
(567 letters)
>mm_chr7_136788381_136789346
Length = 966
Score = 1081 bits (559), Expect = 0.0
Identities = 565/567 (99%), Gaps = 1/567 (0%)
Strand = Plus / Plus
Query: 1 atttctgttgcctgactaaggttccaatgggcccaaactcttccttttatggagaactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttctgttgcctgactaaggttccaatgggcccaaactcttccttttatggagaactct 260
Query: 61 aatcctaaggctcccaagctaattagaaaatcaagagtttgcagaggagagcagccctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatcctaaggctcccaagctaattagaaaatcaagagtttgcagaggagagcagccctgg 320
Query: 121 tgttgaggacatggcaaaggtgtagcccctctttccctccctgcgtgatggctaactcct 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 tgttgaggacatggcaaaggtgtagcccctctt-ccctccctgcgtgatggctaactcct 379
Query: 181 gagcccagggctctgggctctggaaagaaggtcagcaacggccactctgctccagcggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagcccagggctctgggctctggaaagaaggtcagcaacggccactctgctccagcggac 439
Query: 241 agcacagcagaatgggagaccccgagtgtcagagcttttgatctctcaaagggggctgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agcacagcagaatgggagaccccgagtgtcagagcttttgatctctcaaagggggctgaa 499
Query: 301 agttcaaagaacgatgtgctatatcagatttttaaatattggcttgactaaaaagaatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agttcaaagaacgatgtgctatatcagatttttaaatattggcttgactaaaaagaatcc 559
Query: 361 agtccaagccaaacaaaatacatctctaagccaagatcagccttgcatggacaatgtgtg 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agtccgagccaaacaaaatacatctctaagccaagatcagccttgcatggacaatgtgtg 619
Query: 421 ccttctgtgatcataaaagtcagaaagcatagacatcaggcttcatcttgcatccctggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccttctgtgatcataaaagtcagaaagcatagacatcaggcttcatcttgcatccctggg 679
Query: 481 ccgctacactctgagaagtaaagaatgctaacacagagcatcctgctgatgcggctgtgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ccgctacactctgagaagtaaagaatgctaacacagagcatcctgctgatgcggctgtgt 739
Query: 541 atcccaggcacacatgggcttctgctc 567
|||||||||||||||||||||||||||
Sbjct: 740 atcccaggcacacatgggcttctgctc 766
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 966
Length adjustment: 10
Effective length of query: 557
Effective length of database: 956
Effective search space: 532492
Effective search space used: 532492
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
