Query= MSMg01no545_n15.b1 MSMg01no545_n15.b1 CHROMAT_FILE:
MSMg01no545_n15.b1 PHD_FILE: MSMg01no545_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:56 2005
(607 letters)
>mm_chr7_99972226_99973232
Length = 1007
Score = 1151 bits (595), Expect = 0.0
Identities = 601/603 (99%)
Strand = Plus / Plus
Query: 5 gaattctctaaattttaactttaggggaagaagtacaggtatgttttttataacatttat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctaaattttaactttaggggaagaagtacaggtatgttttttataacatttat 264
Query: 65 taaactgtttcattcaaacccaaattgaaaatgatgtactggggtagggctcagctggca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taaactgtttcattcaaacccaaattgaaaatgatgtactggggtagggctcagctggca 324
Query: 125 gaatacttgcctagcatgcaagaagctctgggttaaaccattagcaccaatggaactggg 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 325 gaatacttgcctagcatgcaagaagctctgggttaaaccattagcaccaatggatctggg 384
Query: 185 tacagtagtacttacctgtgatctggacgagggtcaggtgggttaacaggaagcttaagg 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgcagtagtacttacctgtgatctggacgagggtcaggtgggttaacaggaagcttaagg 444
Query: 245 tcacccttaacatagcacattggaggccagcccagcttatctgagaagccatctcagaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcacccttaacatagcacattggaggccagcccagcttatctgagaagccatctcagaag 504
Query: 305 aaagaaattatacacaattaatttagggatggtatgcttatatatgaagacagtgaggaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaagaaattatacacaattaatttagggatggtatgcttatatatgaagacagtgaggaa 564
Query: 365 aatacattttcctgccataccagaagtgatgtgaaaacaaagtaggaatttctttttgaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatacattttcctgccataccagaagtgatgtgaaaacaaagtaggaatttctttttgaa 624
Query: 425 tttcaaagttggaccaataacattcctattctaaataaaaggcccatttaagaaaacctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttcaaagttggaccaataacattcctattctaaataaaaggcccatttaagaaaacctt 684
Query: 485 ctgatccccacattttgctgtaggtaatttagtcacatattaaaattatcctttctccca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctgatccccacattttgctgtaggtaatttagtcacatattaaaattatcctttctccca 744
Query: 545 ctgtacctttatgttagaactctaaatgtctaagaaaagacctttgatccctactttgcc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctgtacctttatgttagaactctaaatgtctaagaaaagacctttgatccctactttgcc 804
Query: 605 ttc 607
|||
Sbjct: 805 ttc 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_n15.g1 MSMg01no545_n15.g1 CHROMAT_FILE:
MSMg01no545_n15.g1 PHD_FILE: MSMg01no545_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:57 2005
(487 letters)
>mm_chr7_100152408_100153294
Length = 887
Score = 623 bits (322), Expect = 0.0
Identities = 373/412 (90%), Gaps = 37/412 (8%)
Strand = Plus / Minus
Query: 1 atctgagtcagtgcctccatcactgaccactaagaacattccagccacaaagatttcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 atctgagtcagtgcctccatcactgaccactaagaacattccagccacaaagatttcctc 353
Query: 61 cctctgctggaagaatctgaagaaacttacctctctggagcctatgtccccacttgtgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cctctgctggaagaatctgaagaaacttacctctctggagcctatgtccccacttgtgcc 293
Query: 121 tctggagaactcttccccaccaacctcatggctggctcctgggcttagccagatgattct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 292 tctggagaactcttccccaccaacctcatggctggctcctgggcttagccagatgatttt 233
Query: 181 gcaaaagctacaacttggtgaagtattcctg------------------gtgta------ 216
||||||||||||||||||||||||||||||| |||||
Sbjct: 232 gcaaaagctacaacttggtgaagtattcctggggtgtgtgtgtgtgtgtgtgtatgtata 173
Query: 217 -atatgtaagtatgtatgtatgt--------acatata----tgtgagtgcatatacgtg 263
|||||||||||||||||||||| ||||||| ||||||||||| ||||||
Sbjct: 172 tatatgtaagtatgtatgtatgtatgtgtacacatatatatgtgtgagtgcatgtacgtg 113
Query: 264 tgtgtgcacatctatatgtgcatgtgtgtacatatgagtaagtatttacatatgtgtatg 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 tgtgtgcacatctatatgtgcatgtgtgtacatatgagtaagtatttacatatgtgtatg 53
Query: 324 tatgtgggtatatatgtatatacttatatatgcatgtaagtatatgcatata 375
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 tatgtgggtatatatgtatatacttatatatgcatgtaagtatatgcatata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
